Job Description P08630 Confidence 100.00% Date Wed Feb 13 11:12:46 GMT 2013 Rank 112 Aligned Residues 233 % Identity 25% Template c4g3dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:nf-kappa-beta-inducing kinase; PDBTitle: crystal structure of human nf-kappab inducing kinase (nik) Resolution 2.90 Å

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		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		E	I	H	P	M	E	L	M	L	M	E	E	L	G	S	G	Q	F	G	V	V	R	R	G	K	W	.	R	G	S	I	D	T	A	V	K	M	M	K	E	G	T	M	S	E	D	D	F	I	E	E	A	K	V	M	T	K	L	Q	H	P	N	L	V	Q	L	Y	G	V	C	S	K	H	R	P	I	Y	I	V	T
Query Conservation																												.
Alig confidence																												.																			.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		D	Y	E	Y	R	E	E	V	H	W	A	T	H	G	R	G	S	F	G	E	V	H	R	M	E	D	K	Q	T	G	F	Q	C	A	V	K	K	V	R	L	E	V	F	R	A	.	.	.	.	E	E	L	M	A	C	A	G	L	T	S	P	R	I	V	P	L	Y	G	A	V	R	E	G	P	W	V	N	I	F	M
Template Known Secondary structure		T	T	B			B	T	T	T							S	S	S	S								T	T	T											T	T	T			T	.	.	.	.					T	T	T	T				T	T	B										T	T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.					.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.		.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		E	Y	M	K	H	G	S	L	L	N	Y	L	R	R	H	E	K	T	L	I	G	N	M	G	L	L	L	D	M	C	I	Q	V	S	K	G	M	T	Y	L	E	R	H	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	S	E	.	N	V	V	K	V	A	D	F	G	L	A	R	Y	V	L	D	D	Q	Y
Query Conservation																																																														.
Alig confidence																		.	.	.																																										.
Template Conservation																		.	.	.
Template Sequence		E	L	L	E	G	G	S	L	G	Q	L	V	K	E	Q	G	.	.	.	C	L	P	E	D	R	A	L	Y	Y	L	G	Q	A	L	E	G	L	E	Y	L	H	S	R	R	I	L	H	G	D	V	K	A	D	N	V	L	L	S	S	D	G	S	H	A	A	L	C	D	F	G	H	A	V	C	L	Q	P	G	T	T
Template Known Secondary structure					T	T		B								S	S	.	.	.	S																							T	T								G	G	G					S	S	S									T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.				.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	S	G	G	T	K	F	P	I	K	W	A	P	P	E	V	L	N	Y	T	R	F	S	S	K	S	D	V	W	A	Y	G	V	L	M	W	E	I	F	T	C	G	K	M	P	Y	G	R	L	K	N	T	E	V	V	E	R	V	Q	R	G	I	I	L	E	K	P	K	S	C	A	K	E	I	Y	D	V	M	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	H	M	A	P	E	V	V	L	G	R	S	C	D	A	K	V	D	V	W	S	S	C	C	M	M	L	H	M	L	N	.	G	C	H	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	R	E	I	P	P	S	C	A	P	L	T	A	Q	A	I	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.								T	T					T																	.	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G			T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.		.	.	.	.	.																.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	W	S	H	G	P	E	E	R	P	A	F	R	V	L	M	D	Q	L	A	L	V	A	Q	T	L	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	L	R	K	E	P	I	H	R	V	S	A	A	E	L	G	G	K	V	N	R	A	L	Q	Q	V	G	G
Template Known Secondary structure				T		S	S	T	T	T	S																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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