 |
| Job Description | P08630 | | Confidence | 100.00% | Date | Wed Feb 13 11:12:46 GMT 2013 |
| Rank | 234 | Aligned Residues | 271 |
| % Identity | 23% | Template | c3tacA_ |
| PDB info |
PDB header:transferase/protein binding | Chain: A: PDB Molecule:peripheral plasma membrane protein cask; |
PDBTitle: crystal structure of the liprin-alpha/cask complex
|
| Resolution | 2.20 Å |
|
 |
|   |   |
507 | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | |
. | . | . | 550 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | V | P | P | T | A | G | L | S | H | D | K | W | E | I | H | P | M | E | L | M | L | M | E | E | L | G | S | G | Q | F | G | V | V | R | R | G | K | W | R | . |
G | S | I | D | T | A | V | K | M | M | K | . |
. |
. |
. |
. |
. |
E | G | T | M | S | E | D | D | F | I | E | E | A | K | V | M | T | K | L | Q | H | P |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   | . |   |   |   |   |
|
|
|
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |
| Template Sequence |   |
H | S | S | G | L | V | P | S | M | A | D | D | D | V | L | F | E | D | V | Y | E | L | C | E | V | I | G | K | G | P | F | S | V | V | R | R | C | I | N | R | E | T | G | Q | Q | F | A | V | K | I | V | D | V | A | K | F | T | S | S | P | G | L | S | T | E | D | L | K | R | E | A | S | I | C | H | M | L | K | H | P |
| Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|