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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank41Aligned Residues246
% Identity23%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540.........550.........560..... ....570.........580.........590.........600
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Query Sequence  MELMLMEELGSGQFGVVRRGKWRGSIDTAVKMMKEGTMSEDD. . . FIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEY
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Template Sequence  EEYQLFEELGKGSVVRRCVKVL. AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL
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TT.TTS
S


BTTB


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   11........20.........30.. .......40.........50.........60.........70.........80.........
 
   601........610.........620.........630.........640.........650.........660 .........670.......
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Query Sequence  MKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENV. . . VKVADFGLARYVLDDQY
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Template Sequence  VTGGELFEDIVARE. . . YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ
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B

B
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   92.......100..... ....110.........120.........130.........140.........150.........160........
 
   678.680.........690.........700.........710.........720.........730.........740. ........750....
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Query Sequence  TSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGII. . . LEKPKSCAKEIYD
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Template Sequence  A. WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD
Template Known Secondary structure  B.


S
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   169 170.........180.........190.........200........ .210.........220.........230.........240......
 
   755....760.........770.....
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Query Sequence  VMKLCWSHGPEERPAFRVLMD
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Template Sequence  LINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
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   247..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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