Job Description P08630 Confidence 98.45% Date Wed Feb 13 11:12:46 GMT 2013 Rank 498 Aligned Residues 78 % Identity 18% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.							.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																		.																												.	.	.	.	.	.
Query SS confidence																																		.																												.	.	.	.	.	.
Query Sequence		E	W	Y	V	G	D	M	S	R	Q	R	A	E	S	L	L	K	Q	G	D	K	E	G	C	F	V	V	R	K	S	S	T	.	K	G	L	Y	T	L	S	L	H	T	K	V	P	Q	S	H	V	K	H	Y	H	I	K	Q	N	A	R	.	.	.	.	.	.	C	E	Y	Y	L	S	E	K	H	C	C	E	T	I
Query Conservation																																		.																												.	.	.	.	.	.
Alig confidence						.												.																.												.	.															.	.	.	.	.	.
Template Conservation						.												.																												.	.
Template Sequence		P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	.	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	.	.	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L
Template Known Secondary structure		T	T			.												.	T	T	S		T	T								S	S		T	T										.	.	T	T											S		S	S	T	T	S			S					T	T				S	S
Template Predicted Secondary structure						.												.																												.	.
Template SS confidence
		7	.	.	10		.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		482	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	L	I	N	Y	H	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	I	V	E	Y	L	Q
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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