Job Description P08630 Confidence 100.00% Date Wed Feb 13 11:12:46 GMT 2013 Rank 201 Aligned Residues 261 % Identity 19% Template c3op5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: human vaccinia-related kinase 1 Resolution 2.40 Å

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		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.			.	.	.	.	.	540	.	.	.	.	.							.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.													.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.												.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.												.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	H	P	M	E	L	M	L	M	E	E	L	G	S	.	.	G	Q	F	G	V	V	R	R	G	K	W	.	.	.	.	.	.	R	G	S	I	D	T	A	V	K	M	M	K	E	G	T	M	S	.	.	.	.	.	.	.	.	.	.	.	.	E	D	D	F	I	E	E	A	K	V	M	T	K	L	Q	H	P
Query Conservation																	.	.												.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.												.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	I	T	D	M	A	A	A	A	W	K	V	G	L	P	I	G	Q	F	G	C	I	Y	L	A	D	M	N	S	S	E	S	V	G	S	D	A	P	C	V	V	K	V	E	P	S	D	N	G	P	L	F	T	E	L	K	F	Y	Q	R	A	A	K	P	E	Q	I	Q	K	W	I	R	T	R	K	L	K	Y	L
Template Known Secondary structure							T	T											.													S	S				T	T		S								T	T																											T	T		S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		580	.	.	.	.	.	.	.	.	.					590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		N	L	V	Q	L	Y	G	V	C	S	.	.	.	.	K	H	R	P	I	Y	I	V	T	E	Y	M	K	H	G	S	L	L	N	Y	L	R	R	H	E	K	T	L	I	G	N	M	G	L	L	L	D	M	C	I	Q	V	S	K	G	M	T	Y	L	E	R	H	N	Y	I	H	R	D	L	A	A	R	N	C	L	V
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.													.																.	.
Template Conservation																												.																.	.
Template Sequence		G	V	P	K	Y	W	G	S	G	L	H	D	K	N	G	K	S	Y	R	F	M	I	M	D	R	F	.	G	S	D	L	Q	K	I	Y	E	A	N	A	K	R	F	.	.	S	R	K	T	V	L	Q	L	S	L	R	I	L	D	I	L	E	Y	I	H	E	H	E	Y	V	H	G	D	I	K	A	S	N	L	L	L
Template Known Secondary structure			S												T	T												.											T	T	S			.	.																						T	T								G	G	G
Template Predicted Secondary structure																												.																.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		656	.			.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.							.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																												.	.	.	.	.	.
Query SS confidence				.	.																												.	.	.	.	.	.
Query Sequence		G	S	.	.	E	N	V	V	K	V	A	D	F	G	L	A	R	Y	V	L	D	D	Q	Y	T	S	S	G	G	T	K	.	.	.	.	.	.	F	P	I	K	W	A	P	P	E	V	L	N	Y	T	R	F	S	S	K	S	D	V	W	A	Y	G	V	L	M	W	E	I	F	T	C	G	K	M	P	Y	G	R	L
Query Conservation				.	.																												.	.	.	.	.	.
Alig confidence				.	.																												.	.	.	.	.	.																																			.
Template Conservation																																																																									.
Template Sequence		N	Y	K	N	P	D	Q	V	Y	L	V	D	Y	G	L	A	Y	R	Y	C	P	E	G	V	H	K	A	Y	A	A	D	P	K	R	C	H	D	G	T	I	E	F	T	S	I	D	A	H	N	G	V	A	P	S	R	R	G	D	L	E	I	L	G	Y	C	M	I	Q	W	L	T	.	G	H	L	P	W	E	D	N
Template Known Secondary structure			S	S		T	T								T	T				S	S	G	G	G					S	S			S	S							T	T	T							T	T																						.	S			T	T	G	G	G
Template Predicted Secondary structure																																																																									.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.											.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	T	E	V	V	E	R	V	Q	R	G	I	I	L	.	.	.	.	.	.	.	.	.	.	E	K	P	K	S	C	A	K	E	I	Y	D	V	M	K	L	C	W	S	H	G	P	E	E	R	P	A	F	R	V	L	M	D	Q	L	A	L	V	A	Q	T	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	D	P	K	Y	V	R	D	S	K	I	R	Y	R	E	N	I	A	S	L	M	D	K	C	F	P	A	A	N	A	P	G	E	I	A	K	Y	M	E	T	V	K	L	L	D	Y	T	E	K	P	L	Y	E	N	L	R	D	I	L	L	Q	G	L	K	A	I
Template Known Secondary structure		T	T																								S		T	T															T			T	T																			T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions