 |
| Job Description | P08630 | | Confidence | 99.52% | Date | Wed Feb 13 11:12:46 GMT 2013 |
| Rank | 344 | Aligned Residues | 91 |
| % Identity | 18% | Template | c3mazA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:signal-transducing adaptor protein 1; |
PDBTitle: crystal structure of the human brdg1/stap-1 sh2 domain in complex with2 the ntal ptyr136 peptide
|
| Resolution | 1.90 Å |
|
 |
|   |   |
405 | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | |
. | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | E | R | Y | E | W | Y | V | G | D | M | S | R | Q | R | A | E | S | L | L | K | Q | G | D | K | E | G | C | F | V | V | R | K | S | S | T | K | G | L | Y | T | L | S | L | H | T | K | V | P | Q | S | H | V | K | H | Y | H | I | K | Q | N | A | R | C | . |
E | Y | Y | L | S | E | K | H | C | C | E | T | I | P | D |
| Query Conservation |   |
|   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
| Template Sequence |   |
L | N | P | M | P | A | C | F | Y | T | V | S | R | K | E | A | T | E | M | L | Q | K | N | P | S | L | G | N | M | I | L | R | P | G | S | D | S | R | N | Y | S | I | T | I | R | Q | E | I | D | I | P | R | I | K | H | Y | K | V | M | S | V | G | Q | N | Y | T | I | E | L | E | K | P | V | T | L | P | N | L | F | S |
| Template Known Secondary structure |   |
|
|
|
|
| T | T | B |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| G | G | G |
| S |  |  |  |  |  |
| T | T | S | S | S |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
| S | S | S |
|  |  |  | S | S |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
|   |
|   |   |
484 | . | . | . | . | . | 490 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | I | N | Y | H | R | H | N | S | G | G | L |
| Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|   |   |   |
|   |
|   |
| Template Sequence |   |
V | I | D | Y | F | V | K | E | T | R | G | N |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|