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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank64Aligned Residues244
% Identity26%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540...... ...550.........560.........570.........580.........590.........600..
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Query Sequence  MELMLMEELGSGQFGVVRRGKWR. GSIDTAVKMMKEGTMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMK
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKS. . SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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   60.........70.. .......80.........90... ......100.........110.........120.........130....
 
   603......610.........620.........630.........640.........650..... ....660.........670.........
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Query Sequence  HGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLV. . . GSENVVKVADFGLARYVLDDQYTS
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Template Sequence  GGELFDEIIHRM. . . KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK
Template Known Secondary structure  S
BS...S

TT
S

SGGGS
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TT

BTTB
B
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   143......150.... .....160.........170.........180.........190.........200.........210.........
 
   680.........690.........700.........710.........720.........730.........740 .........750......
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Query Sequence  SGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGI. . . ILEKPKSCAKEIYDVM
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Template Sequence  ER. . LGTAYYIAPEVLRK. KYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI
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B
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SGGGTTS
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   220. ........230..... ....240.........250..... ....260.........270.........280.........290.....
 
   757..760.........770.........
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Query Sequence  KLCWSHGPEERPAFRVLMDQLAL
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Template Sequence  KQMLQFDSQRRISAQQALEHPWI
Template Known Secondary structure  T
SSTTTS

T
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   296...300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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