Job Description P08630 Confidence 100.00% Date Wed Feb 13 11:12:46 GMT 2013 Rank 78 Aligned Residues 259 % Identity 39% Template c3cc6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein tyrosine kinase 2 beta; PDBTitle: crystal structure of kinase domain of protein tyrosine kinase 2 beta2 (ptk2b) Resolution 1.60 Å

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		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.					.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.			.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																		.	.
Query SS confidence																																		.	.	.	.																		.	.
Query Sequence		H	D	K	W	E	I	H	P	M	E	L	M	L	M	E	E	L	G	S	G	Q	F	G	V	V	R	R	G	K	W	R	G	.	.	.	.	S	I	D	T	A	V	K	M	M	K	E	G	T	M	S	E	D	.	.	D	F	I	E	E	A	K	V	M	T	K	L	Q	H	P	N	L	V	Q	L	Y	G	V	C	S
Query Conservation																																		.	.	.	.																		.	.
Alig confidence																																		.	.	.	.																		.	.
Template Conservation
Template Sequence		G	P	Q	Y	G	I	A	R	E	D	V	V	L	N	R	I	L	G	E	G	F	F	G	E	V	Y	E	G	V	Y	T	N	H	K	G	E	K	I	N	V	A	V	K	T	C	K	K	D	C	T	L	D	N	K	E	K	F	M	S	E	A	V	I	M	K	N	L	D	H	P	H	I	V	K	L	I	G	I	I	E
Template Known Secondary structure						S			G	G	G											S	S	S										T	T													T	T	S																					T	T	B
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	R	P	I	Y	I	V	T	E	Y	M	K	H	G	S	L	L	N	Y	L	R	R	H	E	K	T	L	I	G	N	M	G	L	L	L	D	M	C	I	Q	V	S	K	G	M	T	Y	L	E	R	H	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	S	E	N	V	V	K	V	A	D	F	G	L	A
Query Conservation
Alig confidence					.																									.	.
Template Conservation					.																									.	.
Template Sequence		E	E	P	.	T	W	I	I	M	E	L	Y	P	Y	G	E	L	G	H	Y	L	E	R	N	K	N	S	L	.	.	K	V	L	T	L	V	L	Y	S	L	Q	I	C	K	A	M	A	Y	L	E	S	I	N	C	V	H	R	D	I	A	V	R	N	I	L	V	A	S	P	E	C	V	K	L	G	D	F	G	L	S
Template Known Secondary structure		S	S	S	.									T	T		B									T	T	T		.	.																						T	T							S	G	G	G						T	T									G	G
Template Predicted Secondary structure					.																									.	.
Template SS confidence
		495	.	.		.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.			.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	V	L	D	D	Q	Y	T	S	S	G	G	T	K	F	P	I	K	W	A	P	P	E	V	L	N	Y	T	R	F	S	S	K	S	D	V	W	A	Y	G	V	L	M	W	E	I	F	T	C	G	K	M	P	Y	G	R	L	K	N	T	E	V	V	E	R	V	Q	R	G	I	I	L	E	K	P	K	S	C	A
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	.	.	.	.	.	Y	I	V	T	R	L	P	I	K	W	M	S	P	E	S	I	N	F	R	R	F	T	T	A	S	D	V	W	M	F	A	V	C	M	W	E	I	L	S	F	G	K	Q	P	F	F	W	L	E	N	K	D	V	I	G	V	L	E	K	G	D	R	L	P	K	P	D	L	C	P
Template Known Secondary structure		G	.	.	.	.	.	.	.	.	.								G	G	G																													T	T	T			T	T	T	T	S		G	G	G								T							T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Template SS confidence
		572										.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	I	Y	D	V	M	K	L	C	W	S	H	G	P	E	E	R	P	A	F	R	V	L	M	D	Q	L	A	L	V	A	Q	T	L	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	L	Y	T	L	M	T	R	C	W	D	Y	D	P	S	D	R	P	R	F	T	E	L	V	C	S	L	S	D	V	Y	Q	M	E	K	D
Template Known Secondary structure												T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions