Return to main results Retrieve Phyre Job Id

Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank137Aligned Residues253
% Identity24%Templatec3c0hB_
PDB info PDB header:transferaseChain: B: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: cask cam-kinase domain- amppnp complex, p1 form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540...... ...550...... ...560.........570.........580.........590......
Predicted Secondary structure 



.


......















Query SS confidence 






















.









. . . . . .







































Query Sequence  MELMLMEELGSGQFGVVRRGKWR. GSIDTAVKMM. . . . . . KEGTMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYI
Query Conservation          

 
 

 
      .    



  ......            
   
  
 




   
         
Alig confidence 






















.









......







































Template Conservation    
     

 
 

 

 
        



 
                  

 

  
 
 


              
Template Sequence  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM
Template Known Secondary structure 
SSTTT

TSTT




TTB

TT
Template Predicted Secondary structure 































Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   597..600.........610... ......620.........630.........640.........650...... ...660.........670..
Predicted Secondary structure 






.
















...








Query SS confidence 
















.










































. . .















Query Sequence  VTEYMKHGSLLNYLRRH. EKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVG. . . SENVVKVADFGLARYV
Query Conservation 
 
    
 
   
   .                

   
 


   






  



 ...    


 




   
Alig confidence 
















.










































...















Template Conservation 
 
      
                     
   
                     
                      
Template Sequence  VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL
Template Known Secondary structure 


S
BTT



TT
S


GGGSSSSTT




TT

Template Predicted Secondary structure 














































Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   673......680.........690.........700.........710.........720.........730.........740...... ...
Predicted Secondary structure 



































...


Query SS confidence 









































































. . .


Query Sequence  LDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGIILEKPK. . . SCA
Query Conservation                  
 


         





 
  
 

 
 
  
       
    
        
 ...   
Alig confidence 





.






































.






.


















...


Template Conservation        .            

           





 




 
.
  

  .                        
Template Sequence  GESGLV. AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS. GCLPFYG. TKERLFEGIIKGKYKMNPRQWSHIS
Template Known Secondary structure 
TTS
B.




S
GGG

TT

B
T.SS
SS
S.ST




TTS
Template Predicted Secondary structure 





.


















.






.















Template SS confidence 















































































   170..... ....180.........190.........200.........210.... .....220. ........230.........240......
 
   750.........760.........770.........
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  KEIYDVMKLCWSHGPEERPAFRVLMDQLAL
Query Conservation       

  
   

  


   

  
  
Alig confidence 





























Template Conservation       

   
   
  
 
  


 
   
Template Sequence  ESAKDLVRRMLMLDPAERITVYEALNHPWL
Template Known Secondary structure  T
SSTTTS

TS
Template Predicted Secondary structure 








Template SS confidence 





























   247..250.........260.........270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions