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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank257Aligned Residues219
% Identity23%Templatec2w4oA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type iv; PDBTitle: crystal structure of human camk4 in complex with 4-amino(2 sulfamoyl-phenylamino)-triazole-carbothioic acid (2,6-3 difluoro-phenyl)-amide)
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540...... ...550.........560.........570.........580.........590.........600..
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Query Sequence  MELMLMEELGSGQFGVVRRGKWR. GSIDTAVKMMKEGTMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMK
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Template Sequence  DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK. . . . . . . . . . . KIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT
Template Known Secondary structure  GT
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   44.....50.........60.........70........ .80.........90.........100.........110..
 
   603......610.........620.........630.........640.........650........ .660.........670.........
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Query Sequence  HGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSE. . . NVVKVADFGLARYVLDDQYTS
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Template Sequence  GGELFDRIVEKG. . . YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGTP. . . . . . . . . .
Template Known Secondary structure  S
BTT
S...S

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   123......130.... .....140.........150.........160.........170.........180.........
 
   680.........690.........700.........710.........720.........730......... 740.........750.....
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Query Sequence  SGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRG. . . . IILEKPKSCAKEIYDV
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Template Sequence  . . . . . . . . GYCAPEILRGCAYGPEVDMWSVGIITYILLC. GFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL
Template Known Secondary structure  ........GGS
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   206...210.........220.........230...... ...240.........250.........260.........270......
 
   756...760.........770.....
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Query Sequence  MKLCWSHGPEERPAFRVLMD
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Template Sequence  VRKLIVLDPKKRLTTFQALQ
Template Known Secondary structure  TTS
SSGGGS

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   277..280.........290......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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