278 c2vagA_ Probab=100.00  E-value=9.9e-38  Score=239.56  Aligned_columns=253  Identities=21%

Q ss_pred             EECHHHEEEEEEEEECCCEEEEEEEEC--CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC------CCEEEEEEEC
Q ss_conf             437885789866631388389999966--98199999983884447999999999984799757------3289999868
Q batch____       520 EIHPMELMLMEELGSGQFGVVRRGKWR--GSIDTAVKMMKEGTMSEDDFIEEAKVMTKLQHPNL------VQLYGVCSKH  591 (786)
Q Consensus       520 ~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~Hpni------v~~~g~~~~~  591 (786)
                      ++-.++|+++++||+|+||.||+|+.+  +++.||||+++......+.+.+|+.+|++|+|+|+      +.+.+.+...
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCEEEECCCCCEEE
Q ss_conf             94899998889875999998427778999999999999999999999985913055798878887898399845432034
Q batch____       592 RPIYIVTEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENVVKVADFGLARY  671 (786)
Q Consensus       592 ~~~~iv~E~~~~G~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~yLh~~~iiHrDlk~~NiLi~~~~~vkl~DFGla~~  671 (786)
                      ..++++++++..+.+...........  .......+..+++.++.++|..+++|+|++++|||++.++..++.||+.+..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~  166 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKENGFLPF--RLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERT  166 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCC--CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEE
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCC
T ss_conf             00001221123675211122211101--3656555554455555431101222234554158985788620003454334


Q ss_pred             CCCCCEEEE----------CCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC---
Q ss_conf             248832542----------1554686778977993799974789999999999999388899999898999999981---
Q batch____       672 VLDDQYTSS----------GGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQR---  738 (786)
Q Consensus       672 ~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~P~~~~~~~e~~~~i~~---  738 (786)
                      .........          ........+.+||......++.+.|+|++|+++|++.+ +..|+...+..+.+..+..   
T Consensus       167 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~  245 (330)
T c2vagA_         167 LINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILG  245 (330)
T ss_dssp             ESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHC
T ss_pred             CCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCC
T ss_conf             444321000146633267542001210232100000111123542102258731004-8898875896899999985138


Q ss_pred             ----------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             ----------------------------------------9887887328999999999873789778597899999
Q batch____       739 ----------------------------------------GIILEKPKSCAKEIYDVMKLCWSHGPEERPAFRVLMD  775 (786)
Q Consensus       739 ----------------------------------------~~~~~~p~~~~~~~~~li~~c~~~dp~~RPs~~~il~  775 (786)
                                                              ......+..+++++.+||.+||+.||++|||+++||+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         246 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             89988974420121235465665321000111001233310023565458999999999866588111776789967


