Job Description P08630 Confidence 100.00% Date Wed Feb 13 11:12:46 GMT 2013 Rank 290 Aligned Residues 229 % Identity 25% Template c2qkrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	E	E	L	G	S	G	Q	F	G	V	V	R	R	G	K	W	R	G	S	I	D	T	A	V	K	M	M	K	E	G	T	M	S	E	D	D	F	I	E	E	A	K	V	M	T	K	L	Q	H	P	N	L	V	Q	L	Y	G	V	C	S	K	H	R	P	I	Y	I	V	T	E	Y	M	K	H	G	S	L	L
Query Conservation
Alig confidence																				.												.	.	.	.	.	.	.																														.
Template Conservation																				.												.	.	.	.	.	.	.																														.
Template Sequence		M	E	K	Y	L	E	K	V	G	E	G	V	V	Y	K	A	K	D	.	S	Q	R	I	V	A	L	K	R	I	S	.	.	.	.	.	.	.	T	A	I	R	E	I	S	L	L	K	E	L	H	H	P	N	I	V	S	L	I	D	V	I	H	S	E	C	L	.	T	L	V	F	E	F	M	E	K	D	L	K	K
Template Known Secondary structure		S		B				B												.												.	.	.	.	.	.	.															T	T	B													.								S
Template Predicted Secondary structure																				.												.	.	.	.	.	.	.																														.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	L	R	R	H	E	K	T	L	I	G	N	M	G	L	L	L	D	M	C	I	Q	V	S	K	G	M	T	Y	L	E	R	H	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	S	E	N	V	V	K	V	A	D	F	G	L	A	R	Y	V	L	D	D	Q	Y	T	S	S	G	G	T	K	F	P	I
Query Conservation
Alig confidence									.	.	.																																							.																												.	.	.	.
Template Conservation									.	.	.																																							.																												.	.	.	.
Template Sequence		V	L	D	E	N	K	T	.	.	.	G	L	Q	D	S	Q	I	K	I	Y	L	Y	Q	L	L	R	G	V	A	H	C	H	Q	H	R	I	L	H	R	D	L	K	P	Q	N	L	L	I	.	N	S	D	A	L	K	L	A	D	F	G	L	A	R	A	F	G	I	P	V	R	V	V	T	L	W	Y	.	.	.	.
Template Known Secondary structure							T	T	.	.	.																								T	T								G	G	G				.											T	T				T	T	S								T	T	.	.	.	.
Template Predicted Secondary structure									.	.	.																																							.																												.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	W	A	P	P	E	V	L	N	Y	T	R	F	S	S	K	S	D	V	W	A	Y	G	V	L	M	W	E	I	F	T	C	G	K	M	P	Y	G	R	L	K	N	T	E	V	V	E	R	V	Q	R	G	I	I	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																															.
Template Sequence		.	R	A	P	D	V	L	M	G	S	K	K	Y	S	T	S	V	D	I	W	S	I	G	C	I	F	A	E	M	I	T	.	G	K	P	L	F	P	G	V	T	D	D	D	Q	L	P	K	I	F	S	I	L	G	T	P	N	P	R	E	W	P	Q	V	Q	E	L	P	L	W	K	Q	R	T	F	Q	V	F	E	K
Template Known Secondary structure		.							T	T						T																	.	S	S		S				S	S	G	G	G														T	T	T		T	T	G	G	G	S					S								B
Template Predicted Secondary structure		.																															.
Template SS confidence
			186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
							744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	K	P	K	S	C	A	K	E	I	Y	D	V	M	K	L	C	W	S	H	G	P	E	E	R	P	A	F	R	V	L	M	D
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		K	P	W	S	S	I	I	P	G	F	C	Q	E	G	I	D	L	L	S	N	M	L	C	F	D	P	N	K	R	I	S	A	R	D	A	M	N
Template Known Secondary structure								S	T	T													S		S		T	T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions