Job Description P08630 Confidence 99.01% Date Wed Feb 13 11:12:46 GMT 2013 Rank 475 Aligned Residues 87 % Identity 17% Template c2q13A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:dcc-interacting protein 13 alpha; PDBTitle: crystal structure of bar-ph domain of appl1 Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	S	G	S	M	V	K	R	A	Q	N	K	K	R	F	T	P	V	N	Y	K	H	R	W	F	E	L	T	K	R	T	F	S	Y	F	D	V	E	N	V	E	R	R	R	E	R	G	R	I	H	L	K	G	V	R	L	V	E	E	A	T	V	S	G	E	G	G	D	P	F	A	P	D	G	Y	P	F	Q	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.																		.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.																		.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		R	K	A	G	Y	L	N	A	R	T	.	.	.	.	.	.	.	.	.	.	W	D	R	Q	F	Y	F	T	Q	G	G	N	L	M	S	Q	A	.	.	.	R	G	D	V	A	G	G	L	A	M	D	I	D	N	C	S	V	M	A	.	.	.	.	.	.	.	.	.	V	D	C	E	D	R	R	Y	C	F	Q	I
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.										T	T							.	.	.	S	S		S	S								T	T						.	.	.	.	.	.	.	.	.				T	T		S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																		.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.										.	.	.	.	.	330	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	C	E	I	S	A	S	A	N	S	H	Q	L	E	N	G	N	G	G	G	S	G	V	G	I	E	G	Q	Q	S	G	R	A	V	P	Q	Y	T	L	Y	V	I	A	N	S	E	K	E	R	S	E	W	I	R	A	I	R	Q	V
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	K	S	S	I	L	Q	A	E	S	K	K	D	H	E	E	W	I	C	T	I	N	N	I
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		B							S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.																																.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions