Job Description P08630 Confidence 100.00% Date Wed Feb 13 11:12:46 GMT 2013 Rank 148 Aligned Residues 281 % Identity 17% Template c2kulA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: solution structure of human vaccinia related kinase 1(vrk1) Resolution UNK

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		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550							.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure																																																					.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	S	P	C	D	R	P	V	P	P	T	A	G	L	S	H	D	K	W	E	I	H	P	M	E	L	M	L	M	E	E	L	G	S	G	Q	F	G	V	V	R	R	G	K	W	R	G	S	I	D	.	.	.	.	.	.	T	A	V	K	M	M	K	E	G	T	M	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	S	S	A	K	R	H	L	A	E	Q	F	A	V	G	E	I	I	T	D	M	A	K	K	E	W	K	V	G	L	P	I	G	Q	G	G	F	G	C	I	Y	L	A	D	M	N	S	S	E	S	V	G	S	D	A	P	C	V	V	K	V	E	P	S	D	N	G	P	L	F	T	E	L	K	F	Y	Q	R	A
Template Known Secondary structure													S	S	S	T	T						T	T	S												S	S	S	S	S									S	S				S	S	S	S								T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.					590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		S	E	D	D	F	I	E	E	A	K	V	M	T	K	L	Q	H	P	N	L	V	Q	L	Y	G	V	C	S	.	.	.	.	K	H	R	P	I	Y	I	V	T	E	Y	M	K	H	G	S	L	L	N	Y	L	R	R	H	E	K	T	L	I	G	N	M	G	L	L	L	D	M	C	I	Q	V	S	K	G	M	T	Y
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.													.																.	.
Template Conservation																																														.																.	.
Template Sequence		A	K	P	E	Q	I	Q	K	W	I	R	T	R	K	L	K	Y	L	G	V	P	K	Y	W	G	S	G	L	H	D	K	N	G	K	S	Y	R	F	M	I	M	D	R	F	.	G	S	D	L	Q	K	I	Y	E	A	N	A	K	R	F	.	.	S	R	K	T	V	L	Q	L	S	L	R	I	L	D	I	L	E	Y
Template Known Secondary structure														T	T																		T	T												.											T	T	T			.	.
Template Predicted Secondary structure																																														.																.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.			.	.	.	.	.	.	.	670	.	.	.	.	.	.							.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.															.	.	.	.	.	.
Query SS confidence																											.	.															.	.	.	.	.	.
Query Sequence		L	E	R	H	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	S	E	N	V	V	K	.	.	V	A	D	F	G	L	A	R	Y	V	L	D	D	Q	.	.	.	.	.	.	Y	T	S	S	G	G	T	K	F	P	I	K	W	A	P	P	E	V	L	N	Y	T	R	F	S	S	K	S	D	V	W	A	Y
Query Conservation																											.	.															.	.	.	.	.	.
Alig confidence																											.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	E	H	E	Y	V	H	G	D	I	K	A	S	N	L	L	L	N	Y	K	N	P	D	Q	V	Y	L	V	D	Y	G	L	A	Y	R	Y	C	P	E	G	V	H	K	E	Y	K	E	D	P	K	R	C	H	D	G	T	I	E	F	T	S	I	D	A	H	N	G	V	A	P	S	R	R	G	D	L	E	I	L
Template Known Secondary structure				T	T	T	B			S				G	G	G					T	T										G	G	G			B	S	S	S	T	T					S				S	S				S	S		T	T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.											730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	L	M	W	E	I	F	T	C	G	K	M	P	Y	G	R	L	K	N	.	.	.	.	.	.	.	.	.	.	T	E	V	V	E	R	V	Q	R	G	I	I	L	E	K	P	K	S	C	A	K	E	I	Y	D	V	M	K	L	C	W	S	H	G	P	E	E	R	P	A	F	R	V	L	M	D	Q	L	A	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.
Alig confidence											.											.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		G	Y	C	M	I	Q	W	L	T	.	G	H	L	P	W	E	D	N	L	K	D	P	K	Y	V	R	D	S	K	I	R	Y	R	E	N	I	A	S	L	M	D	K	C	F	P	E	K	N	K	P	G	E	I	A	K	Y	M	E	T	V	K	L	L	D	Y	T	E	K	P	L	Y	E	N	L	R	D	I	L	L	Q
Template Known Secondary structure											.	S	S		T	T	T	T	T	T	T															T							T	T	S		S	S																T	T	T	T	S	S
Template Predicted Secondary structure											.
Template SS confidence
		248	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		780	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	K	A	I
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions