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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank191Aligned Residues249
% Identity21%Templatec2jedA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c theta; PDBTitle: the crystal structure of the kinase domain of the protein2 kinase c theta in complex with nvp-xaa228 at 2.32a3 resolution.
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   521........530.........540...... ...550....... ..560.........570..... ....580.........590....
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Query Sequence  IHPMELMLMEELGSGQFGVVRRGKWR. GSIDTAVKMMK. . . . EGTMSEDDFIEEAKVMTK. LQHPNLVQLYGVCSKHRPI
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Template Sequence  LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL
Template Known Secondary structure 

GGGTTTTT

TT
TTGGGSTTB


SS
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   375....380.........390.........400.........410.........420.........430.........440.........450....
 
   595....600.........610.........620.........630.........640.........650.........660.........670....
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Query Sequence  YIVTEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENVVKVADFGLARYVLD
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Template Sequence  FFVMEYLNGGDLMYHIQSCH. . . KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML
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S
BS...S

TT
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   455....460.........470.... .....480.........490.........500.........510.........520.........530.
 
   675....680.........690.........700.........710.........720.........730.........740.........750....
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Query Sequence  DQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGIILEKPKSCAKEIYD
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Template Sequence  GDAK. TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRMD. NPFYPRWLEKEAKD
Template Known Secondary structure  TT

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TT

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   532... ....540.........550.........560.........570.... .....580.........590.... .....600........
 
   755....760.........770 .....
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Query Sequence  VMKLCWSHGPEERPAF. RVLMD
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Template Sequence  LLVKLFVREPEKRLGVRGDIRQ
Template Known Secondary structure 

SSGGGSBTTBS
GGG
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   609610.........620.........630
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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