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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank169Aligned Residues245
% Identity26%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540...... ...550.........560..... ....570...... ...580.........590.......
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Query Sequence  MELMLMEELGSGQFGVVRRGKWR. GSIDTAVKMMKEGTMSEDD. . . . FIEEAKVMTKL. QHPNLVQLYGVCSKHRPIYIV
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV
Template Known Secondary structure  TTTTTTSS
T
T
TT

TTB

TT
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   340.........350.........360.........370.........380.........390.........400.........410.........
 
   598.600.........610.........620.........630.........640.........650.........660.........670.......
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Query Sequence  TEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENVVKVADFGLARYVLDDQY
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Template Sequence  MEYVNGGDLMYHIQQVG. . . RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV
Template Known Secondary structure 


S
BTTS...S

TT
B



SGGG
TTS



TT
B
S

TT
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   420.........430...... ...440.........450.........460.........470.........480.........490......
 
   678.680.........690.........700.........710.........720.........730.........740.........750.......
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Query Sequence  TSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGIILEKPKSCAKEIYDVMK
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Template Sequence  TTKFCGTP. . DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVAYPKSMSKEAVAICK
Template Known Secondary structure 
B


S
T..TT

TT

B
T.SS
SS

SS
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   497..500.... .....510.........520.........530..... ....540.........550..... ....560.........570..
 
   758.760......... 770.....
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Query Sequence  LCWSHGPEERPA. . . . . FRVLMD
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Template Sequence  GLMTKHPGKRLGCGPEGERDIKE
Template Known Secondary structure  SS
SSGGGSTT
STTT
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   574.....580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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