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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank4Aligned Residues428
% Identity43%Templatec2h8hA_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase src; PDBTitle: src kinase in complex with a quinazoline inhibitor
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   346...350.........360.........370.........380.... .....390.........400.........410.........420....
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Query Sequence  LVVALYPFKAIEGGDLSLEKNAEYEVIDDSQEHWWKVKD. ALGNVGYIPSNYVKPKALLGLERYEWYVGDMSRQRAESLL
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Template Sequence  TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD. . SIQAEEWYFGKITRRESERLL
Template Known Secondary structure 
SS
B


SSSB

B
TT

SSSSTTT

GGGTT..SGGGSTTB

S

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   85....90.........100.........110.........120.........130.........140. ........150.........160..
 
   425. ...430.........440 .........450... ......460.........470.........480.........490.........500
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Query Sequence  KQ. GDKEGCFVVRKSST. KGLYTLSLHTKVP. . QSHVKHYHIKQNARCEYYLSEKHCCETIPDLINYHRHNSGGLACRLK
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Template Sequence  LNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLT
Template Known Secondary structure  T
TT

TT
SSSTT
TTTB
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S
TTSS

TTSSS


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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   501........510.........520.........530.........540.........550.........560.........570.........580
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Query Sequence  SSPCDRPVPPTAGLSHDKWEIHPMELMLMEELGSGQFGVVRRGKWRGSIDTAVKMMKEGTMSEDDFIEEAKVMTKLQHPN
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Template Sequence  TV. CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEK
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SSSSTT
SB

GGG
SSTTT
TTSS



TT
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   243. .....250.........260.........270.........280.........290.........300.........310.........320.
 
   581........590.........600.........610.........620.........630.........640.........650.........660
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Query Sequence  LVQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENV
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Template Sequence  LVQLYAVVS. EEPIYIVTEYMSKGSLLDFLKGETGK. YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV
Template Known Secondary structure  B


.SSS



TTST.T

TT


S

SGGG
GGG
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   322.......330 .........340.........350...... ...360.........370.........380.........390.........
 
   661........670.........680.........690.........700.........710.........720.........730.........740
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Query Sequence  VKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGI
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Template Sequence  CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY
Template Known Secondary structure 

TTSTTT


TT
STTS
GGGS




TTTT

SSTT

TT
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   400.........410.........420.........430.........440.........450.........460.........470.........
 
   741........750.........760.........770........
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Query Sequence  ILEKPKSCAKEIYDVMKLCWSHGPEERPAFRVLMDQLA
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Template Sequence  RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE
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TT

T
SSGGGS

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   480.........490.........500.........510.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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