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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank300Aligned Residues192
% Identity23%Templatec2exeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase clk3; PDBTitle: crystal structure of the phosphorylated clk3
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   568.570.........580.........590.........600.........610.........620.........630.........640.......
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Query Sequence  EEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRD
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Template Sequence  LEINVLKKIKEKFLCVL. . . . . . . . . MSDAFELL. GKNTFEFLKENNFQ. PYPLPHVRHMAYQLCHALRFLHENQLTHTD
Template Known Secondary structure  T


B

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B


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BTTTT
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TTT


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   200.........210...... ...220.... .....230........ .240.........250.........260........
 
   648.650........ .660.........670.........680.........690.........700.........710...
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Query Sequence  LAARNCLVGSE. . . . . . . . . . . . . . NVVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLM
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Template Sequence  LKPENILFVNSEFETLYNEEKSVKNTSIRVADFGSATFDHEHHTTIVATRH. . . . YRPPEVILELGWAQPCDVWSIGCIL
Template Known Secondary structure 

GGG

B


B



GGG
TTS


SS
S
GG....G

TT


ST
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   284.....290.........300.........310.........320.........330.... .....340.........350.........
 
   714.....720.........730........ .740.........750
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Query Sequence  WEIFTCGKMPYGRLKNTEVVERVQR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIILEKPKSCAK
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Template Conservation       .                                                                          
Template Sequence  FEYYR. GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV
Template Known Secondary structure  .SS
S


SS




S
GGGTT


TTS


GGGG
S

S
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   365.... 370.........380.........390.........400.........410.........420.........430.........440...
 
   751........760.........770.....
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Query Sequence  EIYDVMKLCWSHGPEERPAFRVLMD
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Template Sequence  QLFDLMRRMLEFDPAQRITLAEALL
Template Known Secondary structure  T
S
TTTS

T
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   444.....450.........460........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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