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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank97Aligned Residues247
% Identity21%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540...... ...550.........560.........570.........580.........590.........600..
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Query Sequence  MELMLMEELGSGQFGVVRRGKWR. GSIDTAVKMMKEGTMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMK
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCPE. NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS
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TTB


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T
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   7..10.........20.........30.........40....... ..50.........60.........70.........80.....
 
   603......610.........620.........630.........640.........650.........660.........670.........680..
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Query Sequence  HGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENVVKVADFGLARYVLDDQYTSSGG
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Template Sequence  GGELFDRIEPDIGM. . . PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN
Template Known Secondary structure  TGGGGSBTTTB
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SGGG
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B
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   8990.........100.. .......110.........120.........130.........140.........150.........160.....
 
   683......690.........700 .........710.........720.........730......... 740.........750........
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Query Sequence  . TKFPIKWAPPEVLNYTRF. SSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRG. . IILEKPKSCAKEIYDVMKL
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Template Sequence  KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK
Template Known Secondary structure  S

S
GGGS

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   166...170.........180.........190.........200... ......210.........220.........230.........240....
 
   759760.........770.....
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Query Sequence  CWSHGPEERPAFRVLMD
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Template Sequence  ILVENPSARITIPDIKK
Template Known Secondary structure  S
SSTTTS

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   245....250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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