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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank6Aligned Residues414
% Identity41%Templatec2c0iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: src family kinase hck with bound inhibitor a-420983
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   347..350.........360.........370.........380.... .....390.........400.........410.........420.....
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Query Sequence  VVALYPFKAIEGGDLSLEKNAEYEVIDDSQEHWWKVKD. ALGNVGYIPSNYVKPKALLGLERYEWYVGDMSRQRAESLLK
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Template Sequence  VVALYDYEAIHHEDLSFQKGDQMVVL. EESGEWWKARSLATRKEGYIPSNYVARVD. . SLETEEWFFKGISRKDAERQLL
Template Known Secondary structure  SS
B


SSSB

B
TT
.TTTTT

GGGTT..SGGGSTTTT

T
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   62.......70.........80....... ..90.........100.........110...... ...120.........130........
 
   426. ..430.........440 .........450.. .......460.........470.........480.........490.........500.
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Query Sequence  QG. DKEGCFVVRKSST. KGLYTLSLHTKV. . PQSHVKHYHIKQNARCEYYLSEKHCCETIPDLINYHRHNSGGLACRLKS
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Template Sequence  APGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSV
Template Known Secondary structure  STT

TT

SSSTT
TTTB

STT
SSTTSSSTTSS
SS
SS


S
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   139140.........150.........160.........170.........180.........190.........200.........210........
 
   502.......510.........520.........530.........540.........550.........560.........570.........580.
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Query Sequence  SPCDRPVPPTAGLSHDKWEIHPMELMLMEELGSGQFGVVRRGKWRGSIDTAVKMMKEGTMSEDDFIEEAKVMTKLQHPNL
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Template Sequence  PCMSSKPQ. . KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKL
Template Known Secondary structure  B






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TT
SB

GGGTTTTT


SS
T


TTB
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   219220...... ...230.........240.........250.........260.........270.........280.........290......
 
   582.......590.........600.........610.........620.........630.........640.........650.........660.
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Query Sequence  VQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENVV
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Template Sequence  VKLHAVV. TKEPIYIITEFMAKGSLLDFLKSDEGS. KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVC
Template Known Secondary structure 

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SSS


TT
BSTTGG.G

TT


S

SGGG
TT

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   297..300... ......310.........320.........330 .........340.........350.........360.........370....
 
   662.......670.........680.........690.........700.........710.........720.........730.........740.
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Query Sequence  KVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGII
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Template Sequence  KIADFGLAR. . . . . . . . . . . . . VIPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR
Template Known Secondary structure 

TTGGG.............T

GGGS




TTT

SSTT

TT

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   375....380... ......390.........400.........410.........420.........430.........440.
 
   742.......750.........760.........770.........780
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Query Sequence  LEKPKSCAKEIYDVMKLCWSHGPEERPAFRVLMDQLALV
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Template Sequence  MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF
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TT

T
SSGGGS

TT
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   455....460.........470.........480.........490...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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