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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank69Aligned Residues240
% Identity27%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   518.520.........530.........540..... ....550....... ..560.........570.........580.........590..
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Query Sequence  KWEIHPMELMLMEELGSGQFGVVRRGKW. RGSIDTAVKMMK. . . . EGTMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHR
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT
Template Known Secondary structure 


G..GG
SSTTT

TT
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TTB


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   127..130 .........140.........150.........160.........170.........180.........190.........200....
 
   593......600.........610.........620.........630.........640.........650.........660.........670..
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Query Sequence  PIYIVTEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENVVKVADFGLARYV
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Template Sequence  RVYLILEYAPLGTVYRELQKLS. . . KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . .
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TT
BS...S

TTT




GGG
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   205....210.........220...... ...230.........240.........250.........260.........270........
 
   673......680.........690.........700.........710.........720.........730.........740.........750..
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Query Sequence  LDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGIILEKPKSCAKEI
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Template Sequence  . . . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGA
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GGG

GGGTTTTSSGGG.SS
TT

SSTT.




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   279280.........290.........300.........310.. .......320.........330.. .......340....
 
   753......760.........770.........
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Query Sequence  YDVMKLCWSHGPEERPAFRVLMDQLAL
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Template Sequence  RDLISRLLKHNPSQRPMLREVLEHPWI
Template Known Secondary structure  S
SSGGGS

T
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   357..360.........370.........380...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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