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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank98Aligned Residues250
% Identity25%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540...... ...550.........560..... ....570.........580.........590.........
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Query Sequence  MELMLMEELGSGQFGVVRRGKWR. GSIDTAVKMMKEGTMSEDD. . . FIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTE
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Template Sequence  DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD
Template Known Secondary structure  TTTTTTT


SS




TTB


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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   600.........610.........620.........630.........640.........650..... ....660.........670......
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Query Sequence  YMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLV. . . GSENVVKVADFGLARYVLDDQ
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Template Sequence  LVTGGELFEDIVARE. . . FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE
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BTT
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TT
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   91........100..... ....110.........120.........130.........140.........150.........160.......
 
   677..680.........690.........700.........710.........720.........730.........740..... ....750...
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Query Sequence  YTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGIILEKP. . . KSCAKEIY
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Template Sequence  AWHGFAG. . TPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  B


S
S..
GGG

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   169170..... ....180.........190.........200........ .210.........220.........230.........240.....
 
   754.....760.........770.........
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Query Sequence  DVMKLCWSHGPEERPAFRVLMDQLAL
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Template Sequence  SLIDSMLTVNPKKRITADQALKVPWI
Template Known Secondary structure  S
SSGGGS

TTS
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   246...250.........260.........270.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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