 |
| Job Description | P08630 | | Confidence | 99.46% | Date | Wed Feb 13 11:12:46 GMT 2013 |
| Rank | 356 | Aligned Residues | 113 |
| % Identity | 24% | Template | c2b3oA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type |
PDBTitle: crystal structure of human tyrosine phosphatase shp-1
|
| Resolution | 2.80 Å |
|
 |
|   |   |
399 | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | |
. | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | |
|
. | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | K | A | L | L | G | L | E | R | Y | E | W | Y | V | G | D | M | S | R | Q | R | A | E | S | L | L | K | Q | G | D | K | E | G | C | F | V | V | R | K | S | . |
S | T | K | G | L | Y | T | L | S | L | H | T | K | V | P | . |
. |
Q | S | H | V | K | H | Y | H | I | K | Q | N | A | R | C | E | Y | Y | L | S | E | K |
| Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |
| . |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |
|
|   |
|
|
|
|   |
|   |
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
| . |   |   |   |   |   |   |   |   |
|   |   |   |
| Template Sequence |   |
P | L | N | C | S | D | P | T | S | E | R | W | Y | H | G | H | M | S | G | G | Q | A | E | T | L | L | Q | A | K | G | E | P | W | T | F | L | V | R | E | S | L | S | Q | P | G | D | F | V | L | S | V | L | S | D | Q | P | K | S | P | L | R | V | T | H | I | K | V | . |
M | C | E | G | G | R | Y | T | V | G | G | L |
| Template Known Secondary structure |   |
 |
|
|
|
|
| G | G | G |
| T | T | B |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |
| S | S | S | T | T |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | B |
|
| T | T | S | B | B | S | S | S | S |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
. | . | . | . | 170 | . | . | . | . | . | . | . |
|   |
|   |   |
476 | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | |
|
|
|
. | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
H | C | C | E | T | I | P | D | L | I | N | Y | H | R | H | N | . |
. |
. |
. |
S | G | G | L | A | C | R | L | K | S | S | P | C | D | R | P | V | P | P | T | A |
| Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
E | T | F | D | S | L | T | D | L | V | E | H | F | K | K | T | G | I | E | E | A | S | G | A | F | V | Y | L | R | Q | P | Y | Y | A | T | R | V | N | A | A | D |
| Template Known Secondary structure |   |
|
| B | S | S |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
| S | S | S |
|  |  |
|
|
|  |  |
|
|
|
|
|
|
|
| G | G |
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|