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Job DescriptionP08630
Confidence100.00%DateWed Feb 13 11:12:46 GMT 2013
Rank21Aligned Residues248
% Identity17%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   520.........530.........540...... ...550.........560..... ....570.........580.........590.
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Query Sequence  EIHPMELMLMEELGSGQFGVVRRGKWR. GSIDTAVKMMKEGTMSEDD. . . . . . . FIEEAKVMTKLQHPNLVQLYGVCSKH
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Template Sequence  HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP
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GGG
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T
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   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   592.......600.........610.........620.........630.........640.........650.........660.........670.
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Query Sequence  RPIYIVTEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAARNCLVGSENVVKVADFGLARY
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Template Sequence  DKLSFILDLMNGGDLHYHLSQHG. . . VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD
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   265....270.........280....... ..290.........300.........310.........320.........330.........340.
 
   672.......680.........690..... ....700.........710.........720...... ...730.........740.......
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Query Sequence  VLDDQYTSSGGTKFPIKWAPPEVL. NYTRFSSKSDVWAYGVLMWEIFTCGKMPYGR. . . LKNTEVVERVQRGIILEKPKS
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Template Sequence  FSKKKPHASVGTHG. . . YMAPEVLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTM. AVELPDS
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   342.......350..... ....360.........370.........380...... ...390.........400......... 410......
 
   748.750.........760........ .770.....
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Query Sequence  CAKEIYDVMKLCWSHGPEERP. . . . . AFRVLMD
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Template Sequence  FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE
Template Known Secondary structure  S


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   417..420.........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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