Job Description P08630 Confidence 99.52% Date Wed Feb 13 11:12:46 GMT 2013 Rank 346 Aligned Residues 101 % Identity 21% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

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		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.						.	.	.	.
Predicted Secondary structure																																						.																																			.	.	.	.	.
Query SS confidence																																						.																																			.	.	.	.	.
Query Sequence		L	E	R	Y	E	W	Y	V	G	D	M	S	R	Q	R	A	E	S	L	L	K	Q	G	D	K	E	G	C	F	V	V	R	K	S	S	T	.	K	G	L	Y	T	L	S	L	H	T	K	V	P	Q	S	H	V	K	H	Y	H	I	K	Q	N	A	R	C	E	Y	Y	L	S	E	.	.	.	.	.	K	H	C	C
Query Conservation																																						.																																			.	.	.	.	.
Alig confidence																																						.										.	.	.																							.	.	.	.	.
Template Conservation																																																.	.	.
Template Sequence		M	D	A	V	A	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	.	.	.	Y	H	G	Y	I	Y	T	Y	R	V	S	Q	T	E	T	G	S	W	S	A	E	T	A	P	G	V	H	K	R	Y	F
Template Known Secondary structure						S	S	B			S																T	T								S	S	S	T	T								.	.	.	S	S	S											T	T	S							S	T	T	S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	I	P	D	L	I	N	Y	H	R	H	N	S	G	G	L	A	C	R	L	K	S	S	P	C	D	R	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	I	K	N	L	I	S	A	F	Q	K	P	D	Q	G	I	V	I	P	L	Q	Y	P	V	E	K	K	S	S
Template Known Secondary structure		S	S								T	T	S	S		S	S	S	S	S				S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions