Return to main results Retrieve Phyre Job Id

Job DescriptionQ7KV33
Confidence31.20%DateTue Jan 22 11:34:33 GMT 2013
Rank204Aligned Residues36
% Identity19%Templated1o7fa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DEP domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1411........1420.........1430... ......1440......
Predicted Secondary structure 












..








Query SS confidence 






















. .












Query Sequence  YHGAITRIEAETTLRPLSEGSFL. . VRNCESTKQDYSL
Query Conservation        
  
   
     
   .. 
        
 
Alig confidence 






















..












Template Conservation       

 


 


 

  


 

     
 
    
Template Sequence  TSCVHSRTQAVGMWQVLLEDGVLNHVDQERHFQDKYLF
Template Known Secondary structure  SS

S
TTSSS

SS

SSS
Template Predicted Secondary structure 



















Template SS confidence 





































   231........240.........250.........260........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions