Job Description Q7KV33 Confidence 99.42% Date Tue Jan 22 11:34:33 GMT 2013 Rank 99 Aligned Residues 84 % Identity 23% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		1398	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.		.	.	.	.	1460		.	.	.	.	.	.	.	.	.	1470	.	.
Predicted Secondary structure																																																												.						.													.	.	.
Query SS confidence																																																												.						.													.	.	.
Query Sequence		L	I	D	V	T	I	P	L	E	R	Q	G	W	Y	H	G	A	I	T	R	I	E	A	E	T	T	L	R	P	L	S	E	G	S	F	L	V	R	N	C	E	S	T	K	Q	D	Y	S	L	S	L	K	G	A	K	G	F	M	.	H	M	R	I	Q	.	R	N	E	T	G	Q	Y	I	L	G	Q	F	.	.	.
Query Conservation																																																												.						.													.	.	.
Alig confidence							.	.	.	.	.	.	.				.																																											.						.													.	.	.
Template Conservation							.	.	.	.	.	.	.				.
Template Sequence		V	I	N	H	P	.	.	.	.	.	.	.	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V
Template Known Secondary structure						T	.	.	.	.	.	.	.	T			.												T	T	S		T	T								S	S		T	T										T	T											S		S	S	T	T	S			S
Template Predicted Secondary structure							.	.	.	.	.	.	.				.
Template SS confidence
		3	.	.	.	.								.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
			1473	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	R	P	F	E	T	V	P	E	M	I	R	H	F	C	L	N
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N
Template Known Secondary structure		T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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