Job Description Q7KV33 Confidence 44.66% Date Tue Jan 22 11:34:33 GMT 2013 Rank 173 Aligned Residues 43 % Identity 42% Template c3o37D_ PDB info PDB header:transcription/protein binding Chain: D: PDB Molecule:transcription intermediary factor 1-alpha; PDBTitle: crystal structure of trim24 phd-bromo complexed with h3(1-10)k42 peptide Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	I	D	F	N	A	G	E	A	M	V	E	C	A	G	P	C	G	S	C	F	H	R	N	C	V	D	C	V	T	G	D	V	A	H	I	L	A	T	G	G	G	Y	Y	S	G	L	E	W	Y	C	R	T	C	R
Query Conservation
Alig confidence											.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	A	V	C	Q	N	G	G	E	.	.	L	L	C	C	E	K	C	P	K	V	F	H	L	S	C	H	V	P	T	L	T	N	F	P	S	G	.	.	.	.	.	.	.	.	.	.	.	E	W	I	C	T	F	C	R
Template Known Secondary structure			T	T	T				S	S	.	.					S	S	S	S					T	T	T	S	S	S			S	S			S	S	.	.	.	.	.	.	.	.	.	.	.					T	T	T	S
Template Predicted Secondary structure											.	.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		829	830	.	.	.	.	.	.	.			.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.												.	.	.	.	.	.	870	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions