Job Description Q7KV33 Confidence 80.46% Date Tue Jan 22 11:34:33 GMT 2013 Rank 129 Aligned Residues 46 % Identity 33% Template c2ro1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription intermediary factor 1-beta; PDBTitle: nmr solution structures of human kap1 phd finger-bromodomain Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	L	C	W	I	D	F	N	A	G	E	A	M	V	E	C	A	G	P	C	G	S	C	F	H	R	N	C	V	D	C	V	T	G	D	V	A	H	I	L	A	T	G	G	G	Y	Y	S	G	L	E	W	Y	C	R	T	C	R
Query Conservation
Alig confidence														.							.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.							.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	I	C	R	V	C	Q	K	P	G	D	.	L	V	M	C	N	Q	.	C	E	F	C	F	H	L	D	C	H	L	P	A	L	Q	D	V	P	G	E	.	.	.	.	.	.	.	.	.	.	.	E	W	S	C	S	L	C	H
Template Known Secondary structure					B	T	T	T				S	S	.					T	T	.	T			B			S	T	T	S	T	T			S	S				T	.	.	.	.	.	.	.	.	.	.	.	T			T	T	T	T	S
Template Predicted Secondary structure														.							.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.		.	.	.	640	.	.		.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.												.	.	.	.	.	.	.	670

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions