Return to main results Retrieve Phyre Job Id

Job DescriptionQ7KV33
Confidence68.24%DateTue Jan 22 11:34:33 GMT 2013
Rank149Aligned Residues40
% Identity28%Templatec2k17A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription initiation factor tfiid subunit 3; PDBTitle: solution structure of the taf3 phd domain in complex with a2 h3k4me3 peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.
Predicted Secondary structure 

























Query SS confidence 



















































Query Sequence  FNAGEAMVECAGPCGSCFHRNCVDCVTGDVAHILATGGGYYSGLEWYCRTCR
Query Conservation                                                      
Alig confidence 











.










...........
















Template Conservation        

 

 .
  
 
  
  ...........          
 
  
 
Template Sequence  PDDGSPMIGCDD. CDDWYHWPCVG. . . . . . . . . . . IMAAPPEEMQWFCPKCA
Template Known Secondary structure  B
SS


SS.S

T...........

S


TTS



TT
Template Predicted Secondary structure 







.





...........












Template SS confidence 



















































   876...880....... ..890........ .900.........910.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions