Phyre 2 alignment of Q7KV33 with c2ysrA_

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Job Description | Q7KV33
Confidence | 29.00% | Date | Tue Jan 22 11:34:33 GMT 2013
Rank | 211 | Aligned Residues | 34
% Identity | 18% | Template | c2ysrA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:dep domain-containing protein 1; | PDBTitle: solution structure of the dep domain from human dep domain-2 containing protein 1
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1413 | . | . | . | . | . | . | 1420 | . | . | . | . | . | . | . | . | . | 1430 | . | . | . |  |  | . | . | . | . | . | . |  |  |  | 1440 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
Query Sequence |  | G | A | I | T | R | I | E | A | E | T | T | L | R | P | L | S | E | G | S | F | L | . | . | V | R | N | C | E | S | . | . | . | T | K | Q | D | Y | S | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | E | V | T | R | Q | Q | T | I | Q | L | L | R | K | F | L | K | N | H | V | I | E | D | I | K | G | R | W | G | S | E | N | V | D | D | N | N | Q | L
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  | S | S |  |  |  | S |  | S |  |  |  | S | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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