Phyre 2 alignment of Q7KV33 with c2fuuA_

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Job Description | Q7KV33
Confidence | 74.67% | Date | Tue Jan 22 11:34:33 GMT 2013
Rank | 138 | Aligned Residues | 50
% Identity | 24% | Template | c2fuuA_
PDB info | PDB header:protein binding | Chain: A: PDB Molecule:bromodomain phd finger transcription factor; | PDBTitle: nmr solution structure of the phd domain from the human2 bptf in complex with h3(1-15)k4me3 peptide
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | F | C | R | L | C | W | I | D | F | N | A | G | E | A | M | V | E | C | A | G | P | C | G | S | C | F | H | R | N | C | V | D | C | V | T | G | D | V | A | H | I | L | A | T | G | G | G | Y | Y | S | G | L | E | W | Y | C | R | T | C | R | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | Y | C | . | I | C | K | T | P | Y | D | E | S | K | F | Y | I | G | C | D | R | . | C | Q | N | W | Y | H | G | R | C | V | G | I | L | Q | S | E | A | . | . | . | . | . | . | . | . | . | . | E | L | I | D | E | Y | V | C | P | Q | C | Q | S
Template Known Secondary structure |  |  | S | B | . | T | T | T | B |  |  |  | T | T | S |  |  |  |  |  | T | T | . | T |  |  |  |  |  | G | G | G | G | T |  |  | S | G | G | G | . | . | . | . | . | . | . | . | . | . | T | S |  | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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