Phyre 2 alignment of Q7KV33 with c1fbvA_

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Job Description | Q7KV33
Confidence | 69.14% | Date | Tue Jan 22 11:34:33 GMT 2013
Rank | 147 | Aligned Residues | 57
% Identity | 23% | Template | c1fbvA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:signal transduction protein cbl; | PDBTitle: structure of a cbl-ubch7 complex: ring domain function in2 ubiquitin-protein ligases
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1411 | . | . | . | . | . | . | . | . | 1420 | . | . | . | . | . |  |  | . | . | . | . | 1430 | . | . | . | . | . | . | . | . | . | 1440 | . | . | . | . | . | . | . | . | . | 1450 | . | . | . | . | . | . | . | . | . | 1460 | . | . | . | . | . | . | . | . | . | 1470 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | H | G | A | I | T | R | I | E | A | E | T | T | L | R | . | . | P | L | S | E | G | S | F | L | V | R | N | C | E | S | T | K | Q | D | Y | S | L | S | L | K | G | A | K | G | F | M | H | M | R | I | Q | R | N | E | T | G | Q | Y | I | L | G | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
Template Sequence |  | Y | M | A | F | L | T | Y | D | E | V | K | A | R | L | Q | K | F | I | H | K | P | G | S | Y | I | F | R | L | S | C | T | R | L | G | Q | W | A | I | G | Y | V | T | A | D | G | N | I | L | Q | T | I | P | H | N | K | P | . | . | . | . | L | F | Q
Template Known Secondary structure |  | B |  | S | S |  |  |  |  |  |  |  |  |  |  | G | G | G | T | T | S | T | T |  |  |  |  |  |  |  | S | S | S | T | T | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  | S | S |  | . | . | . | . |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . |  |  |  |  | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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