Phyre 2 alignment of Q7KV33 with c3u5pF_

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Job Description | Q7KV33
Confidence | 80.59% | Date | Tue Jan 22 11:34:33 GMT 2013
Rank | 128 | Aligned Residues | 44
% Identity | 30% | Template | c3u5pF_
PDB info | PDB header:transcription | Chain: F: PDB Molecule:e3 ubiquitin-protein ligase trim33; | PDBTitle: crystal structure of the complex of trim33 phd-bromo and h3(1-28)2 k9me3k14ack18ack23ac histone peptide
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | C | R | L | C | W | I | D | F | N | A | G | E | A | M | V | E | C | A | G | P | C | G | S | C | F | H | R | N | C | V | D | C | V | T | G | D | V | A | H | I | L | A | T | G | G | G | Y | Y | S | G | L | E | W | Y | C | R | T | C | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | W | C | A | V | C | . | . | . | . | Q | N | G | G | D | L | L | C | C | E | K | . | C | P | K | V | F | H | L | T | C | . | . | . | . | . | . | . | . | . | . | . | H | V | P | T | L | L | S | F | P | S | G | D | W | I | C | T | F | C | R
Template Known Secondary structure |  | S | B | T | T | T | . | . | . | . |  |  |  | S | S |  |  |  |  | S | S | . | S | S |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . | . | . | . | S | S | S |  |  | S | S |  |  | S | S |  |  |  |  | T | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 889 | 890 | . | . | . |  |  |  |  | . | . | . | . | . | . | 900 | . | . | . | . |  | . | . | . | . | . | 910 | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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