Phyre 2 alignment of Q7KV33 with c2l43A_

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Job Description | Q7KV33
Confidence | 82.57% | Date | Tue Jan 22 11:34:33 GMT 2013
Rank | 125 | Aligned Residues | 46
% Identity | 24% | Template | c2l43A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:n-teminal domain from histone h3.3, linker, phd1 domain | PDBTitle: structural basis for histone code recognition by brpf2-phd1 finger
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | C | R | L | C | W | I | D | F | N | A | G | E | A | M | V | E | C | A | G | P | C | G | S | C | F | H | R | N | C | V | D | C | V | T | G | D | V | A | H | I | L | A | T | G | G | G | Y | Y | S | G | L | E | W | Y | C | R | T | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | C | S | I | C | M | D | G | E | S | Q | N | S | N | V | I | L | F | C | D | M | C | N | L | A | V | H | Q | E | C | Y | G | . | V | P | . | . | . | . | . | . | . | . | . | . | . | . | Y | I | P | E | G | Q | W | L | C | R | H | C
Template Known Secondary structure |  |  |  | S | S |  |  | S | S | S | S |  | S |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  | T | . |  | S | . | . | . | . | . | . | . | . | . | . | . | . | S |  |  | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |  | . | 60 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 70 | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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