Phyre 2 alignment of Q7KV33 with d1o7fa1

Return to main results | Retrieve Phyre Job Id

Job Description | Q7KV33
Confidence | 31.20% | Date | Tue Jan 22 11:34:33 GMT 2013
Rank | 204 | Aligned Residues | 36
% Identity | 19% | Template | d1o7fa1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | DEP domain
Resolution | 2.5

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1411 | . | . | . | . | . | . | . | . | 1420 | . | . | . | . | . | . | . | . | . | 1430 | . | . | . |  |  | . | . | . | . | . | . | 1440 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | H | G | A | I | T | R | I | E | A | E | T | T | L | R | P | L | S | E | G | S | F | L | . | . | V | R | N | C | E | S | T | K | Q | D | Y | S | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | S | C | V | H | S | R | T | Q | A | V | G | M | W | Q | V | L | L | E | D | G | V | L | N | H | V | D | Q | E | R | H | F | Q | D | K | Y | L | F
Template Known Secondary structure |  | S | S |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  | S | S |  |  | S | S |  |  | S | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions