Phyre 2 alignment of Q7KV33 with d7odca1

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Job Description | Q7KV33
Confidence | 25.79% | Date | Tue Jan 22 11:34:33 GMT 2013
Rank | 227 | Aligned Residues | 33
% Identity | 21% | Template | d7odca1
SCOP info | Domain of alpha and beta subunits of F1 ATP synthase-like | Alanine racemase C-terminal domain-like | Eukaryotic ODC-like
Resolution | 1.60

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1423 | . | . | . | . | . | . | 1430 | . | . | . | . | . | . | . | . | . | 1440 | . | . | . | . | . | . | . | . | . | 1450 | . | . | . | . | . | . | . | . | . | 1460 | . | . | . | . | . | . | . | . | . | 1470 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | L | R | P | L | S | E | G | S | F | L | V | R | N | C | E | S | T | K | Q | D | Y | S | L | S | L | K | G | A | K | G | F | M | H | M | R | I | Q | R | N | E | T | G | Q | Y | I | L | G | Q | F | S | R | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Sequence |  | N | L | P | E | M | H | V | G | D | W | M | L | F | . | . | . | E | N | M | G | A | Y | T | V | A | A | A | S | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | F | N | G | F | Q | R | P
Template Known Secondary structure |  |  |  |  |  |  |  | T | T |  |  |  |  |  | . | . | . |  | S |  |  | S | S | S | G | G | G |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | G | G |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 371 | . | . | . | . | . | . | . | . | 380 | . | . | . |  |  |  | . | . | . | . | . | . | 390 | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | 400 | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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