Job Description Q9XYM0 Confidence 100.00% Date Wed Feb 13 11:39:18 GMT 2013 Rank 3 Aligned Residues 159 % Identity 37% Template c3qwyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2 Resolution 2.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.
Predicted Secondary structure																											.																												.	.	.																.	.	.	.
Query SS confidence																											.																												.	.	.																.	.	.	.
Query Sequence		F	D	V	S	D	R	N	S	W	Y	F	G	P	M	S	R	Q	D	A	T	E	V	L	M	N	.	E	R	E	R	G	V	F	L	V	R	D	S	N	S	I	A	G	D	Y	V	L	C	V	R	E	D	T	.	.	.	K	V	S	N	Y	I	I	N	K	V	Q	Q	Q	D	Q	.	.	.	.	I	V	Y	R	I
Query Conservation																											.																												.	.	.																.	.	.	.
Alig confidence																											.															.													.	.	.																.	.	.	.
Template Conservation																																										.
Template Sequence		F	D	P	F	E	W	R	S	F	Y	F	P	G	M	S	R	E	E	A	H	K	L	L	G	E	P	Q	V	S	I	G	T	F	L	M	R	D	S	S	R	.	P	G	E	Y	S	L	T	V	R	E	A	D	E	G	N	A	V	C	H	Y	L	I	E	R	G	E	P	K	E	D	G	T	A	A	A	G	V	K	I
Template Known Secondary structure				G	G	G	G	G	G	G			T	T												S	T	T			T	T								S	S	.	T	T										S	S	S	S														T	T	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		G	D	Q	S	F	D	N	L	P	K	L	L	T	F	Y	T	L	H	Y	L	D	T	T	P	L	K	R	P	.	A	C	R	R	V	E	K	V	I	G	K	F	D	F	V	G	S	D	Q	D	D	L	P	F	Q	R	G	E	V	L	T	I	V	R	K	D	E	D	Q	W	W	T	A	R	N	S	S	G	K	I	G
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		A	N	Q	S	F	P	D	I	P	A	L	L	N	H	F	K	M	R	V	L	T	E	A	S	L	L	A	A	Y	K	K	P	I	I	E	V	V	V	G	T	F	K	F	T	G	E	R	E	T	D	L	P	F	E	Q	G	E	R	L	E	I	L	S	K	T	N	Q	D	W	W	E	A	R	N	A	L	G	T	T	G
Template Known Secondary structure		T	T				S	S											S		S	S	S																		S	S		B			S	S	T	T	B			B		T	T										S	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		155	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	P	V	P	Y	I	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	P	A	N	Y	V	Q	I
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions