Job Description Q9XYM0 Confidence 99.68% Date Wed Feb 13 11:39:18 GMT 2013 Rank 195 Aligned Residues 132 % Identity 15% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		R	N	S	W	Y	F	G	P	M	S	R	Q	D	A	T	E	V	L	M	N	E	R	E	R	G	V	F	L	V	R	D	S	N	S	I	A	G	D	Y	V	L	C	V	R	E	.	D	T	K	V	S	N	Y	I	I	N	K	V	Q	Q	Q	D	Q	I	V	Y	R	I	G	D	Q	S	F	D	N	L	P	K	L	L
Query Conservation																																															.
Alig confidence								.														.	.											.													.										.	.	.	.
Template Conservation								.														.	.											.																							.	.	.	.
Template Sequence		K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	.	.	.	.	E	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I
Template Known Secondary structure		G	S	T	T			.														.	.	S	S									.	S	S	T	T										T	T								.	.	.	.				S	S					T	T				S	S
Template Predicted Secondary structure								.														.	.											.																							.	.	.	.
Template SS confidence
		791	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.			810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.					.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		T	F	Y	T	L	H	Y	L	D	T	T	P	L	K	R	P	A	C	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	E	K	V	I	G	K	F	D	F	V	G	S	D	Q	D	D	.	.	L	P	F	Q	R	G	E	V	L	T	I	V	R	K	D	E	D	Q	W	W	T	A	R	N
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		S	V	Y	V	R	P	I	L	R	N	L	K	S	I	K	A	H	A	K	Y	F	N	S	P	E	D	A	E	K	L	L	S	S	F	D	G	S	K	V	V	Y	A	F	Y	F	S	R	K	Y	P	G	K	L	T	F	A	Y	N	N	G	S	I	L	E	E	Y	I	G	V	S	D	M	L	T	Y	N	N	S
Template Known Secondary structure				T														S	T	T	B		S		T	T	T	S						T			S	S	S									S	S	S	T	T								S	S	S									S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		863	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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