Return to main results Retrieve Phyre Job Id

Job DescriptionQ9XYM0
Confidence99.73%DateWed Feb 13 11:39:18 GMT 2013
Rank137Aligned Residues67
% Identity18%Templatec2dmoA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:neutrophil cytosol factor 2; PDBTitle: refined solution structure of the 1st sh3 domain from human2 neutrophil cytosol factor 2 (ncf-2)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260....
Predicted Secondary structure 





































Query SS confidence 


































































Query Sequence  RKLPAYARVKQSRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKNGHFPFTHVEFVDDCDLS
Query Conservation              
   
    



  



 
    
 


 
   

 
 






 
      
Alig confidence 


































































Template Conservation            

 

      


   

 
 
       
      
  
  
  

  
    

Template Sequence  SSGSSGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVSGPSSG
Template Known Secondary structure 
S


S
SS



SSSS



TT


SSS
TT
STT


S


Template Predicted Secondary structure 

































Template SS confidence 


































































   2.......10.........20.........30.........40.........50.........60........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions