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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank109Aligned Residues236
% Identity25%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810.........820 .........830 .........840.........850.........860.........870
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVT
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Template Sequence  ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM
Template Known Secondary structure  TTTTTTT



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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   871........880.........890.........900.........910.........920.........930.........940.........950
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Query Sequence  EYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDVG
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Template Sequence  EYIEGPTLSEYIESHGP. . LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . . .
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   88.90.........100.... .....110.........120.........130.........140.........150.....
 
   951........960.........970.........980.........990.........1000.........1010 .........1020......
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Query Sequence  KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKME. . . . APEGCPPEIYEMMRQA
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Template Sequence  . KTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRA
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   156...160.........170.........180......... 190.........200.........210.........220.........230...
 
   1027..1030.... .....1040.......
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Query Sequence  WDLNPAKR. PTFAELKVKLQLL
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Template Sequence  TEKDKANRYKTIQEMKDDLSSV
Template Known Secondary structure  T
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   249250.........260.........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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