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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank286Aligned Residues243
% Identity21%Templatec3utoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase region from c.elegans (fn31-nl-kin-crd-ig26)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810.........820 .........830 .........840.........850.........860.........870...
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYM
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Template Sequence  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM
Template Known Secondary structure  GTTTTTT



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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   874.....880.........890.........900.........910.........920......... 930.........940..... ....
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Query Sequence  SKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISED. . CVAKVSDFGLAREECY. . NLDV
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Template Sequence  SGGELFEKVADEHNK. MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV
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   234.....240........ .250.........260.........270.........280.........290.........300.........310..
 
   950.........960.........970.........980.........990.........1000...... ...1010.........1020......
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVG. . . YKMEAPEGCPPEIYEMMRQA
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Template Sequence  TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKL
Template Known Secondary structure 
SSGGG

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   313......320.........330.........340........ .350.........360.........370.........380.........390.
 
   1027..1030.........1040..
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Query Sequence  WDLNPAKRPTFAELKV
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Template Sequence  LLADPNTRMTIHQALE
Template Known Secondary structure  S
SSGGGS

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   392.......400.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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