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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank206Aligned Residues231
% Identity29%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   795....800.........810.........820 .........830 .........840.........850.........860.........870.
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Query Sequence  IPEAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTE
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVME
Template Known Secondary structure 

TTT


SSTT
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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   872.......880.........890.........900.........910.........920......... 930.........940.........
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Query Sequence  YMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISED. . CVAKVSDFGLAREECYNLDV
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Template Sequence  YASGGELFERICNAGR. . FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYT. . . . . . . . .
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   96...100.........110. ........120.........130.........140.........150.........160....
 
   950.........960...... ...970.........980.........990.........1000...... ...1010.........1020...
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Query Sequence  GKLPIKWTAPEALKNGR. FSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVG. . . . . YKMEAPEGCPPEIYEMM
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Template Sequence  . . . . PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI
Template Known Secondary structure  ....GGG


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   180.........190.........200.........210.. .......220.........230.........240.........250....
 
   1024.....1030.........1040.
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Query Sequence  RQAWDLNPAKRPTFAELK
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Template Sequence  SRIFVADPAKRISIPEIR
Template Known Secondary structure  S
SSGGGS

T
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   255....260.........270..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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