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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank33Aligned Residues236
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810.........820 .........830.........840.........850.........860.........870.....
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSK
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Template Sequence  ESYFKV. . RKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEG
Template Known Secondary structure  GT..

TTT



T.T


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TT
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   55....60 .........70.........80.........90 .........100.........110.........120.........130.
 
   876...880.........890.........900.........910.........920...... ...930.........940. ........950
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Query Sequence  GSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLI. . . SEDCVAKVSDFGLAR. . EECYNLDVG
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Template Sequence  GELFEQIINRHK. . FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR
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BS
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SGGGSSTT

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   150.........160. ........170.........180.........190.........200.........210.........220.......
 
   951........960.........970.........980.........990.........1000.........1010.. .......1020......
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Query Sequence  KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAP. . . . EGCPPEIYEMMRQA
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Template Sequence  LGTAYYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKG. KYYFDFNDWKNISDEAKELIKLM
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B
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   228.230.........240. ........250.........260. ........270.........280. ........290.........300....
 
   1027..1030.........1040.
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Query Sequence  WDLNPAKRPTFAELK
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Template Sequence  LTYDYNKRCTAEEAL
Template Known Secondary structure  T
SSTTTS

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   305....310.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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