Return to main results Retrieve Phyre Job Id

Job DescriptionQ8INJ8
Confidence98.04%DateWed Feb 13 11:35:57 GMT 2013
Rank388Aligned Residues96
% Identity28%Templatec3ps5A_
PDB info PDB header:hydrolase, signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 6; PDBTitle: crystal structure of the full-length human protein tyrosine2 phosphatase shp-1
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   682.......690.........700. ........710.........720.........730.........740.........750.........760
Predicted Secondary structure 










.



































Query SS confidence 



















.


























































Query Sequence  MPWFHGSITRDEAEHLLQPR. EDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTIDDEEYFENLGQLVAHYEA
Query Conservation                      .                                                           
Alig confidence 



















.


























































Template Conservation    



 
 
  

 

     

 



 
    
   

      
 
  
      
 
     
 

 


  
  
Template Sequence  VRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQ
Template Known Secondary structure 
S


SS



TT

SSSTTSTT
SS
SSSS

BSST
Template Predicted Secondary structure 

































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   761........770.......
Predicted Secondary structure 
















Query SS confidence 
















Query Sequence  DADGLCTQLIKCLPKLG
Query Conservation                   
Alig confidence 
















Template Conservation      
         
  
Template Sequence  QQGVLQDRDGTIIHLKY
Template Known Secondary structure  TSS

B
SS

B




Template Predicted Secondary structure 
















Template SS confidence 
















   82.......90........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions