Return to main results Retrieve Phyre Job Id

Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank12Aligned Residues245
% Identity26%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   793......800.........810......... 820.........830..... ....840........ .850.........860....
Predicted Secondary structure 




..



.....
.





Query SS confidence 


























. .















. . . . .












.















Query Sequence  WVIPEAELQLRESIGKGEFGDVMLGIL. . RNEKVAVKMLKDEGAV. . . . . QKFLAEASVMTTL. EHDNLVKFIGLVFTSK
Query Conservation                
 
  
 
     ..     
 
        .....     
       . 
  
           
Alig confidence 


























..















.....












.















Template Conservation               

 
 

 
            


                  
   
     

 

 
        
Template Sequence  PVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD
Template Known Secondary structure 



TTSSBTTTB
SSS

TTTTT
TT

TTB



B
SS
Template Predicted Secondary structure 






























Template SS confidence 















































































   289290.........300.........310.........320.........330.........340.........350.........360........
 
   865....870.........880.........890.........900.........910.........920.........930.........940....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  HLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREEC
Query Conservation        
      
                              

     
 
 
  
 
       
  


      
Alig confidence 






















..






















































Template Conservation      
 
   

 
   
     ..           

   
  

   






  



      

 


 
    
Template Sequence  RLYFVMEYVNGGDLMYHIQQVGR. . FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI
Template Known Secondary structure 


S
BSS..

TS




STT
SSS



TT


Template Predicted Secondary structure 








..





















Template SS confidence 















































































   415....420.........430....... ..440.........450.........460.........470.........480.........490..
 
   945 ....950.........960.........970.........980.........990.........1000.........1010.........1020..
Predicted Secondary structure 
..




































Query SS confidence 
. .












































































Query Sequence  Y. . NLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEM
Query Conservation   ..             

           
  
 
    
       
                                
Alig confidence 
..







































.



















.














Template Conservation           

  
 


      
    












 .
  

           
   .    
   
    

Template Sequence  WDGVTTKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVAYPKSMSKEAVAI
Template Known Secondary structure 
TT

B


S
SSS

T


BST.SS
SS

SSSS.




TTS
Template Predicted Secondary structure 












.










.








Template SS confidence 















































































   493......500.........510.........520.........530..... ....540.........550..... ....560.........570
 
   1023......1030...... ...1040.
Predicted Secondary structure 





.....
Query SS confidence 













. . . . .




Query Sequence  MRQAWDLNPAKRPT. . . . . FAELK
Query Conservation          
  

 .....     
Alig confidence 













.....




Template Conservation 
  

   
  
            
Template Sequence  CKGLMTKHPGKRLGCGPEGERDIK
Template Known Secondary structure  S
SSSTT
TT
STT
Template Predicted Secondary structure 










Template SS confidence 























   572.......580.........590.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions