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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank50Aligned Residues236
% Identity25%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810......... 820.........830.........840.........850.........860.........870.....
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Query Sequence  AELQLRESIGKGEFGDVMLGIL. . RNEKVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSK
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Template Sequence  EMYQRVKKLG. . . SGEVLLCRDKVTHVERAIKIIRKSSN. SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG
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   60......... 70.........80.........90..... ....100.........110.........120.........130.....
 
   876...880.........890.........900.........910.........920...... ...930.........940.........950
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Query Sequence  GSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLI. . . SEDCVAKVSDFGLAREECYNLDVG. .
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Template Sequence  GELFDEIIHRMK. . FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER
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BSS..

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   144.....150..... ....160.........170.........180.........190.........200.........210.........220.
 
   951........960.........970.........980.........990.........1000....... ..1010.........1020.......
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Query Sequence  KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGY. . . KMEAPEGCPPEIYEMMRQAW
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Template Sequence  LGTAYYIAPEVLRK. KYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML
Template Known Secondary structure 
S
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SGGGTTS
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   222.......230..... ....240.........250..... ....260.........270.........280.........290.........
 
   1028.1030.........1040.
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Query Sequence  DLNPAKRPTFAELK
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Template Sequence  QFDSQRRISAQQAL
Template Known Secondary structure 
SSTTTS

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   300.........310...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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