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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank195Aligned Residues232
% Identity25%Templatec3i6uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   797..800.........810.........820 .........830 .........840.........850.........860.........870..
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Query Sequence  EAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEY
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Template Sequence  RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGLNVETEIEILKKLNHPCIIKIKNFFDAEDY. YIVLEL
Template Known Secondary structure  TT
SSSTTT

GGGGTT





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   217..220.........230.........240.........250.........260.........270.........280......... 290.....
 
   873......880.........890.........900.........910.........920....... ..930.........940.........
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Query Sequence  MSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLIS. . . EDCVAKVSDFGLAREECYNLDV
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Template Sequence  MEGGELFDKVVGNKR. . LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG. . . . .
Template Known Secondary structure 
TT
BGGGGTSSS

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S


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   304.....310........ .320.........330.........340.........350.........360.........370......
 
   950.........960.........970.........980.........990.........1000.........1010.. .......1020.....
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAP. . . . EGCPPEIYEMMRQ
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Template Sequence  . . . . . PTYLAPEVLVAGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK
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TT

TTTT

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   388.390.........400.........410........ .420.........430.........440.........450.........460.
 
   1026...1030.........1040..
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Query Sequence  AWDLNPAKRPTFAELKV
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Template Sequence  LLVVDPKARFTTEEALR
Template Known Secondary structure  S
SSTTTS

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   466...470.........480..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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