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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank310Aligned Residues184
% Identity17%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   803......810.........820.........830 .........840.........850.........860.........870..
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Query Sequence  RESIGKGEFGDVMLGILRNEKVAVKMLK. . . . . . . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEY
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Template Sequence  VEVNWIGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY
Template Known Secondary structure  S






STT


TTS
GGGTT




TTTT
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   319320.........330.........340.........350.........360.........370.........380.........390........
 
   873......880.........890.........900.........910.........920.........930.........940.........950..
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Query Sequence  MSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDVGKL
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Template Sequence  INGKLAKDVIEDN. . . . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. . DKDLYIIDFGLGKISNLDEDKAV.
Template Known Secondary structure 

SGGGTTTT
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S


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   416...420........ .430.........440.........450......... 460.........470.........480..
 
   953......960.........970.........980.........990.........1000.....
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Query Sequence  PIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEV
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Template Sequence  . DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVY. DRWEI. . . . ILELMKDVER
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TTT
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   483......490.........500.........510.... ..... 520.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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