Return to main results Retrieve Phyre Job Id

Job DescriptionQ8INJ8
Confidence99.89%DateWed Feb 13 11:35:57 GMT 2013
Rank315Aligned Residues131
% Identity23%Templatec3ek7A_
PDB info PDB header:fluorescent proteinChain: A: PDB Molecule:myosin light chain kinase, green fluorescent protein, PDBTitle: calcium-saturated gcamp2 dimer
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   909910.........920...... ...930... ......940. ........950.... .....960.........
Predicted Secondary structure 






...



........






..











......






Query SS confidence 

















. . .






. . . . . . . .







. .












. . . . . .














Query Sequence  LEAKKVVHRDLAARNVLI. . . SEDCVAK. . . . . . . . VSDFGLAR. . EECYNLDVGKLPI. . . . . . KWTAPEALKNGRFSN
Query Conservation 

     
 
 
  
 
 ...      
........  


   ..             ......    

         
Alig confidence 

















...






........







..












......








.




Template Conservation   
   
 




 

            
          
 
               
        

 




 .  
  
Template Sequence  GHAVRAIGRLSSLENVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLS. KDPNE
Template Known Secondary structure 



GGGTBTTS
SSSS





S.

TT
Template Predicted Secondary structure 




















































.




Template SS confidence 















































































   48.50.........60.........70.........80.........90.........100.........110.........120. .....
 
   970.. .......980.. .......990......... 1000...... ...1010.... .....1020.........1030.....
Predicted Secondary structure  ..........









.

.







..






Query SS confidence 


. . . . . . .









. . .
















.






.







. .




















Query Sequence  KSD. . . . . . . MWSFGILLWE. . . IYSFGRVPYPRIPLADV. VKHVEVG. YKMEAPEG. . CPPEIYEMMRQAWDLNPAKRP
Query Conservation    
.......  
 
    
...       
         .       .        ..                
  

Alig confidence 


.......









...


.












.






.







..




















Template Conservation 
 
       


 




    

 .
  

       
    
           
  

  

 

  

   
  
 
Template Sequence  KRDHMVLLEFVTAAGITLSKGEELFT. GVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVT
Template Known Secondary structure 
SS
S


TTS.S
TTTTTTTTSS
SS
GGGGTT
Template Predicted Secondary structure 















.



































Template SS confidence 















































































   127..130.........140.........150.. .......160.........170.........180.........190.........200.....
 
   1036...1040.
Predicted Secondary structure 
Query SS confidence 





Query Sequence  TFAELK
Query Conservation        
Alig confidence 





Template Conservation 

 


Template Sequence  TLVQCF
Template Known Secondary structure  T

GGG
Template Predicted Secondary structure 
Template SS confidence 





   221.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions