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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank213Aligned Residues222
% Identity25%Templatec3efwA_
PDB info PDB header:transferase/inhibitorChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   794.....800.........810.........820 .........830 .........840.........850.........860......
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Query Sequence  VIPEAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHL
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Template Sequence  QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV
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GGGTTTTT

T
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TTB


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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   867..870.........880.........890.........900.........910.........920.........930.........940......
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Query Sequence  YLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYN
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Template Sequence  YLILEYAPLGTVYRELQKLSK. . FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFL. . . . . . . .
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TT
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   207..210.........220....... ..230.........240.........250.........260.........270......
 
   947..950.........960.........970.........980.........990.........1000.........1010.........1020......
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Query Sequence  LDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQA
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Template Sequence  . . . . . . . . DYLPPEMI. . . . . . EKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGARDLISRL
Template Known Secondary structure  ........TT

GGGT......

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   294.....300. ........310........ .320.........330........ .340.........350.......
 
   1027..1030.........1040.
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Query Sequence  WDLNPAKRPTFAELK
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Template Sequence  LKHNPSQRPMLREVL
Template Known Secondary structure  S
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   364.....370........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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