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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank185Aligned Residues233
% Identity27%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810.........820 .........830 .........840.........850.........860.........870.
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. NEKVAVKMLK. . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTE
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Template Sequence  DRYQR. . VKKLGSYGEVLLCKDKTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVME
Template Known Secondary structure  TT..





GGGS


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TT


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   21.... ....30.........40.........50.........60.........70.........80.........90........
 
   872.......880.........890.........900.........910.........920.........930 .........940.........
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Query Sequence  YMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDC. . VAKVSDFGLAREECYNLDV
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Template Sequence  VYRGGELFDEIILRQK. . FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSDALIKIVDFGLSA. . . . . HFE
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BSS..

TTT


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STT
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   102.......110....... ..120.........130.........140.........150.........160.........170. ...
 
   950.........960.........970.........980.........990.........1000....... ..1010.........1020......
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGY. . . KMEAPEGCPPEIYEMMRQA
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Template Sequence  RLGTAYYIAPEVLR. KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLM
Template Known Secondary structure  TTT
TTT

T.T


T.SS
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   183......190...... ...200.........210....... ..220.........230.........240.........250.........260
 
   1027..1030.........1040.
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Query Sequence  WDLNPAKRPTFAELK
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Template Sequence  LTYEPSKRISAEEAL
Template Known Secondary structure  T
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TTTS

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   261........270.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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