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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank234Aligned Residues237
% Identity22%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   791........800.........810.........820 .........830 .........840......... 850.........860...
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Query Sequence  KGWVIPEAELQLRESIGKGEFGDVMLGILR. NEKVAVKMLK. . . . DEGAVQKFLAEASVMTTLE. . HDNLVKFIGLVFTS
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Template Sequence  QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD
Template Known Secondary structure 
TT

SS
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SS

GGG
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S
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   516...520.........530.........540.........550.........560.........570.........580.........590.....
 
   864.....870.........880.........890.........900.........910.........920.........930.........940...
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Query Sequence  KHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREE
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Template Sequence  QYIYMVMECG. NIDLNSWLKKKKS. . IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA. . .
Template Known Secondary structure  S


.S
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TT






GGGT.T


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   596...600..... ....610........ .620.........630.........640.........650....... ..660........
 
   944.....950.........960...... ...970.........980.........990... ......1000...... ...1010.........1020
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Query Sequence  CYNLDVGKLPIKWTAPEALKNGR. FSNKSDMWSFGILLWEIYSFGRVPYPR. IPLADVVKHVEVG. YKMEAPEGCPPEIY
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Template Sequence  . . . . . . NQGTVNYMPPEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ
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TTTT

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S
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   669670.........680.........690.........700..... ....710.........720.........730.........740.
 
   1021........1030.........1040.
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Query Sequence  EMMRQAWDLNPAKRPTFAELK
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Template Sequence  DVLKCCLKRDPKQRISIPELL
Template Known Secondary structure  T
SSTTTS

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   766...770.........780......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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