Job Description Q8INJ8 Confidence 97.90% Date Wed Feb 13 11:35:57 GMT 2013 Rank 405 Aligned Residues 128 % Identity 27% Template c3c5iD_ PDB info PDB header:transferase Chain: D: PDB Molecule:choline kinase; PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520 Resolution 2.20 Å

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		795	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.											.	.	.	.	.	.	.	830		.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.		.	850	.	.	.	.	.	.	.	.	.	860	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.									.																			.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.									.																			.
Query Sequence		I	P	E	A	E	L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	N	E	.	.	.	.	.	.	.	.	.	.	K	V	A	V	K	M	L	K	.	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	.	E	H	D	N	L	V	K	F	I	G	L	V	F	T
Query Conservation																														.	.	.	.	.	.	.	.	.	.									.																			.
Alig confidence													.	.	.															.	.	.	.	.	.	.	.	.	.									.																			.
Template Conservation													.	.	.
Template Sequence		F	T	E	D	N	L	R	V	K	Q	I	.	.	.	L	L	T	N	Q	L	F	E	V	G	L	K	E	E	T	A	N	N	Y	N	S	I	R	T	R	V	L	F	R	I	Y	G	K	H	V	D	E	L	Y	N	T	I	S	E	F	E	V	Y	K	T	M	S	K	Y	K	I	A	P	Q	L	L	N	T	F	N	G
Template Known Secondary structure				G	G	G							.	.	.				S															S	T	T	S											T	T	G	G	G	T	S															T	T	S	S								T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		863	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	H	L	Y	L	V	T	E	Y	M	S	K	G	S	L	V	D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.													.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	G	R	I	E	E	W	L	Y	G	D	P	L	.	.	.	.	.	.	.	.	.	.	R	I	D	D	L	K	N	P	T	I	L	I	G	I	A	N	V	L	G	K	F	H	T	L	S	R	K	R	H	L	P	E	H	W	D	R	T	P	C	I	F	K	M	M	E	K	W	K	N	Q	L	F	K	Y
Template Known Secondary structure		.	.	.	.									S				.	.	.	.	.	.	.	.	.	.		G	G	G	G	G																	T					S				T	T	S			S															T	T	S
Template Predicted Secondary structure		.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
						110	.	.	.	.	.	.	.	.	.	120	.											.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
																																							913	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																									.
Template Sequence		K	N	I	E	K	Y	N	C	D	I	H	K	Y	I	K	E	S	D	K	F	I	K	F	M	K	V	Y	S	K	S	D	N	L	A	N	T	I	V	F	C	H	N	D	L	Q	E	N	N	I	I	N	T	N	K	C	.	L	R	L	I	D	F	E	Y	S
Template Known Secondary structure		T	T	G	G	G	T		S	S																			T	T	S			G	G	G							S			S	G	G	G					S	S		.							T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions