278 c2vagA_ Probab=100.00  E-value=1.9e-39  Score=261.55  Aligned_columns=242  Identities=23%

Q ss_pred             HHEEEEEEEEECCCEEEEEEEEC---CEEEEEEEEC-CHHHHHHHHHHHHHHHHCCCCCE------EEEEEEEEECCEEE
Q ss_conf             87789977741498179999998---9269999978-98999999999999985698847------33999998489169
Q batch____       798 AELQLRESIGKGEFGDVMLGILR---NEKVAVKMLK-DEGAVQKFLAEASVMTTLEHDNL------VKFIGLVFTSKHLY  867 (1052)
Q Consensus       798 ~~~~~~~~~g~g~~g~v~~~~~~---~~~~a~k~~~-~~~~~~~~~~e~~~~~~~~h~~i------~~~~~~~~~~~~~~  867 (1052)
                      ++|++++.||+|+||.||+|+++   |+.||||+++ ++...+.+++|+.+|+.|+|+||      +.+.+.+.....++
T Consensus        13 ~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~~~~~   92 (330)
T c2vagA_          13 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC   92 (330)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred             CCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEC
T ss_conf             82599999876288489999997679839999998399056899999999999843122233122200001233320000


Q ss_pred             EEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEECCCCEEEECCCCCCC------
Q ss_conf             99978998759999997288888899999999999999999998492203368887767789849987642520------
Q batch____       868 LVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR------  941 (1052)
Q Consensus       868 ~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~~~~h~d~k~~n~l~~~~~~~k~~dfg~~~------  941 (1052)
                      ++++++ .+++...........+.+.....++.+++.+|.++|..+++|||+||+|||++.++..++.|||.+.      
T Consensus        93 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~~~~~  171 (330)
T c2vagA_          93 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTLINPD  171 (330)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEESCCC
T ss_pred             CCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCC
T ss_conf             122112-3675211122211101365655555445555543110122223455415898578862000345433444432


Q ss_pred             --------CCCCCCCCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC--------
Q ss_conf             --------1333434000186878977984898864789999999999999488988987799999999980--------
Q batch____       942 --------EECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEV-------- 1005 (1052)
Q Consensus       942 --------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~e~~~~~~~p~~~~~~~~~~~~~~~-------- 1005 (1052)
                              ..........++..|++||......+..+.|+|++||++|++++ ++.||......+.+..+..        
T Consensus       172 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~  250 (330)
T c2vagA_         172 IKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGPLPKH  250 (330)
T ss_dssp             EEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCSCCHH
T ss_pred             CEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCCCCHH
T ss_conf             1000146633267542001210232100000111123542102258731004-889887589689999998513889988


Q ss_pred             -----------------------------------CCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHH
Q ss_conf             -----------------------------------888888877899999999997146977869999999
Q batch____      1006 -----------------------------------GYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELK 1041 (1052)
Q Consensus      1006 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~p~~Rp~~~~~~ 1041 (1052)
                                                         ......+..+++++.+||.+||..||.+|||+.||+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL  321 (330)
T c2vagA_         251 MIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL  321 (330)
T ss_dssp             HHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHH
T ss_conf             97442012123546566532100011100123331002356545899999999986658811177678996


