Job Description Q8INJ8 Confidence 100.00% Date Wed Feb 13 11:35:57 GMT 2013 Rank 117 Aligned Residues 245 % Identity 40% Template c2qobA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase domain, base structure Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		794	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820						.	.	.	.	.	.	.	.	.	830				.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.											.	.	.
Query SS confidence																													.	.	.	.	.											.	.	.
Query Sequence		V	I	P	E	A	E	L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	.	.	.	.	.	N	E	K	V	A	V	K	M	L	K	.	.	.	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K	H
Query Conservation																													.	.	.	.	.											.	.	.
Alig confidence																													.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		E	L	D	A	T	N	I	S	I	D	K	V	V	G	A	G	E	F	G	E	V	C	S	G	R	L	K	L	P	S	K	K	E	I	S	V	A	I	K	T	L	K	V	G	Y	T	E	K	Q	R	R	D	F	L	G	E	A	S	I	M	G	Q	F	D	H	P	N	I	I	R	L	E	G	V	V	T	K	S	K	P
Template Known Secondary structure		B			G	G	G											S	S	S										T	T	S												T	T																	T	T				T	T	B									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
		866	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	L	V	T	E	Y	M	S	K	G	S	L	V	D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A	R	E	E	C	Y
Query Conservation
Alig confidence																								.	.																																																					.	.	.	.
Template Conservation																								.	.																																																					.	.	.	.
Template Sequence		V	M	I	V	T	E	M	E	N	G	S	L	D	S	F	L	R	K	H	D	A	Q	.	.	F	T	V	I	Q	L	V	G	M	L	R	G	I	A	S	G	M	K	Y	L	S	D	M	G	Y	V	H	R	D	L	A	A	R	N	I	L	I	N	S	N	L	V	C	K	V	S	D	F	G	L	S	R	.	.	.	.
Template Known Secondary structure									T	T		B							T	T	T	T		.	.	S																						T	T				S				G	G	G					T	T									T	T			.	.	.	.
Template Predicted Secondary structure																								.	.																																																					.	.	.	.
Template SS confidence
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.			.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.
		946	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	D	V	G	K	L	P	I	K	W	T	A	P	E	A	L	K	N	G	R	F	S	N	K	S	D	M	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	A	D	V	V	K	H	V	E	V	G	Y	K	M	E	A	P	E	G	C	P	P	E	I	Y	E	M	M	R	Q
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	L	K	I	P	I	R	W	T	S	P	E	A	I	A	Y	R	K	F	T	S	A	S	D	V	W	S	Y	G	I	V	L	W	E	V	M	S	Y	G	E	R	P	Y	W	E	M	S	N	Q	D	V	I	K	A	V	D	E	G	Y	R	L	P	P	P	M	D	C	P	A	A	L	Y	Q	L	M	L	D
Template Known Secondary structure		.	.	.						G	G	G	S																												T	T	T			T	T	T	T													T							T	T		B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.
		1026	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	D	L	N	P	A	K	R	P	T	F	A	E	L	K	V	K	L	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	W	Q	K	D	R	N	N	R	P	K	F	E	Q	I	V	S	I	L	D	K	L
Template Known Secondary structure			T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions